RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 PRKCBP05771 671 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 FGFR3P22607 806 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 ARPP19P56211 112 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 NFATC3Q12968 1075 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 TARBP2Q15633 366 aaKnown RBP9.2□□□□□ -0.94
PRIM1-208ENST00000552590 UGCGQ16739 394 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 MTERF2Q49AM1 385 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 MCMDC2Q4G0Z9 681 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 FBXO43Q4G163 708 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 TRIM68Q6AZZ1 485 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 TCEAL8Q8IYN2 117 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 BPIFB1Q8TDL5 484 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 SPACA7Q96KW9 195 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 POLR3CQ9BUI4 534 aaPredicted RBP9.2□□□□□ -0.94
PRIM1-208ENST00000552590 NXF3Q9H4D5 531 aaKnown RBP9.2□□□□□ -0.94
PRIM1-208ENST00000552590 TCEAL9Q9UHQ7 104 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 SAMM50Q9Y512 469 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 BACE2Q9Y5Z0 518 aa9.2□□□□□ -0.94
PRIM1-208ENST00000552590 OTOGQ6ZRI0 2925 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 IGKV6-21A0A0C4DH24 114 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 ANTXRLA6NF34 631 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 PRAMEF12O95522 483 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 ATF2P15336 505 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 TKTP29401 623 aaKnown RBP9.19□□□□□ -0.94
PRIM1-208ENST00000552590 ADD1P35611 737 aaKnown RBP9.19□□□□□ -0.94
PRIM1-208ENST00000552590 NT5C2P49902 561 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 TWF1Q12792 350 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 ELAVL2Q12926 359 aaKnown RBP9.19□□□□□ -0.94
PRIM1-208ENST00000552590 TUSC3Q13454 348 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 RUNX3Q13761 415 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 NR6A1Q15406 480 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 SPDYCQ5MJ68 293 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 DHRS13Q6UX07 377 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 PLA2G4DQ86XP0 818 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 SMAP1Q8IYB5 467 aaPredicted RBP9.19□□□□□ -0.94
PRIM1-208ENST00000552590 LEMD2Q8NC56 503 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 BAHD1Q8TBE0 780 aaPredicted RBP9.19□□□□□ -0.94
PRIM1-208ENST00000552590 CPB2Q96IY4 423 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 P2RY13Q9BPV8 354 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 EBF3Q9H4W6 596 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 TMPRSS4Q9NRS4 437 aa9.19□□□□□ -0.94
PRIM1-208ENST00000552590 SEC63Q9UGP8 760 aaKnown RBP9.19□□□□□ -0.94
PRIM1-208ENST00000552590 NUP210Q8TEM1 1887 aaPredicted RBP9.19□□□□□ -0.94
PRIM1-208ENST00000552590 CELSR1Q9NYQ6 3014 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 PLXND1Q9Y4D7 1925 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 FAM86B1E9PN63 330 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 ANP32CO43423 234 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 FAM86B2P0C5J1 330 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 SRGAP2CP0DJJ0 459 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 HNRNPLP14866 589 aaKnown RBP eCLIP9.18□□□□□ -0.94
PRIM1-208ENST00000552590 CLDN6P56747 220 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 NFKB2Q00653 900 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 MYO1EQ12965 1108 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 MAP7D1Q3KQU3 841 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 PLEKHG6Q3KR16 790 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 TMEM259Q4ZIN3 620 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 LMBRD2Q68DH5 695 aaPredicted RBP9.18□□□□□ -0.94
PRIM1-208ENST00000552590 CYB5R4Q7L1T6 521 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 RABEPKQ7Z6M1 372 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 CCDC33Q8N5R6 958 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 OTUD7AQ8TE49 926 aaPredicted RBP9.18□□□□□ -0.94
PRIM1-208ENST00000552590 FGF11Q92914 225 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 CEP89Q96ST8 783 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 FAM83CQ9BQN1 747 aa9.18□□□□□ -0.94
PRIM1-208ENST00000552590 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
PRIM1-208ENST00000552590 MYO18AQ92614 2054 aaKnown RBP9.17□□□□□ -0.94
PRIM1-208ENST00000552590 hCG_1642624A0A1W2PR95 340 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 I3L4J1 428 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 ARSAP15289 507 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 MCM2P49736 904 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 SEC13P55735 322 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 RPL6Q02878 288 aaKnown RBP9.17□□□□□ -0.94
PRIM1-208ENST00000552590 ZNF33AQ06730 810 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 SLC8B1Q6J4K2 584 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 ANKS3Q6ZW76 656 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 SRGAP1Q7Z6B7 1085 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 LIN37Q96GY3 246 aaPredicted RBP9.17□□□□□ -0.94
PRIM1-208ENST00000552590 TMEM176AQ96HP8 235 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 NAF1Q96HR8 494 aaKnown RBP9.17□□□□□ -0.94
PRIM1-208ENST00000552590 ZNF577Q9BSK1 485 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 LRRC3Q9BY71 257 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 TRIM6Q9C030 488 aaPredicted RBP9.17□□□□□ -0.94
PRIM1-208ENST00000552590 IL21RQ9HBE5 538 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 THG1LQ9NWX6 298 aaKnown RBP9.17□□□□□ -0.94
PRIM1-208ENST00000552590 OBP2AQ9NY56 170 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 NOP53Q9NZM5 478 aaKnown RBP9.17□□□□□ -0.94
PRIM1-208ENST00000552590 PARP2Q9UGN5 583 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 COL4A3BPQ9Y5P4 624 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 ADGRG4Q8IZF6 3080 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 TTC41PQ6P2S7 1318 aa9.17□□□□□ -0.94
PRIM1-208ENST00000552590 AP5Z1O43299 807 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 LILRA1O75019 489 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 ALDH1A2O94788 518 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 AMPD1P23109 780 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 GATA4P43694 442 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 TMPRSS3P57727 454 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 GRIK2Q13002 908 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 CRY1Q16526 586 aa9.16□□□□□ -0.94
PRIM1-208ENST00000552590 GPR158Q5T848 1215 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms