RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 GABRB2P47870 512 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 AARSP49588 968 aaKnown RBP eCLIP13.44□□□□□ -0.26
CACNB3-223ENST00000552480 DNA2P51530 1060 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 ATN1P54259 1190 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-223ENST00000552480 TAP1Q03518 808 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 NAA30Q147X3 362 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-223ENST00000552480 PTPROQ16827 1216 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 ERCC6LQ2NKX8 1250 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 PTPN20Q4JDL3 420 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 PPP1R26Q5T8A7 1209 aaPredicted RBP13.44□□□□□ -0.26
CACNB3-223ENST00000552480 LLGL2Q6P1M3 1020 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 DNAJC24Q6P3W2 148 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 PHLDB2Q86SQ0 1253 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 OSTM1Q86WC4 334 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 UBL4BQ8N7F7 174 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 FEZF2Q8TBJ5 459 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 SPATA18Q8TC71 538 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 URGCPQ8TCY9 931 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 TSC1Q92574 1164 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 CD101Q93033 1021 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 BTBD6Q96KE9 485 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 TNIP3Q96KP6 325 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 MIS12Q9H081 205 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 HIPK3Q9H422 1215 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 DPEP3Q9H4B8 488 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 TMEM161AQ9NX61 479 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 CACNG4Q9UBN1 327 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 HESX1Q9UBX0 185 aa13.44□□□□□ -0.26
CACNB3-223ENST00000552480 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
CACNB3-223ENST00000552480 MYO1FO00160 1098 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 ENPP3O14638 875 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 GABRDO14764 452 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 SPOPO43791 374 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 PROSCO94903 275 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 CXCL10P02778 98 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 PFKMP08237 780 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 LMO2P25791 158 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 MAN1A1P33908 653 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 FAAP100Q0VG06 881 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 PDCLQ13371 301 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 ZNF268Q14587 947 aaPredicted RBP13.43□□□□□ -0.26
CACNB3-223ENST00000552480 ELF2Q15723 593 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 TRIM60Q495X7 471 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 PKDCCQ504Y2 493 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 NOMO2Q5JPE7 1267 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 CLLU1OSQ5K130 101 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 PPP1R15BQ5SWA1 713 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 WSCD1Q658N2 575 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 DSTYKQ6XUX3 929 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 RASGEF1CQ8N431 466 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 C12orf29Q8N999 325 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 IPO4Q8TEX9 1081 aaKnown RBP13.43□□□□□ -0.26
CACNB3-223ENST00000552480 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 C18orf8Q96DM3 657 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 CPXM1Q96SM3 734 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 FAM49BQ9NUQ9 324 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
CACNB3-223ENST00000552480 TSC2P49815 1807 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 CCDC66A2RUB6 948 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 HCRTO43612 131 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 ERBB2P04626 1255 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 PDGFRBP09619 1106 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 ODC1P11926 461 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 CTNNA1P35221 906 aaKnown RBP13.42□□□□□ -0.26
CACNB3-223ENST00000552480 GJA8P48165 433 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 LHX1P48742 406 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 BCAT1P54687 386 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 PSMC1P62191 440 aaKnown RBP13.42□□□□□ -0.26
CACNB3-223ENST00000552480 TLE2Q04725 743 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 DSC1Q08554 894 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 CYP4A22Q5TCH4 519 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 XYLT1Q86Y38 959 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 B3GALNT2Q8NCR0 500 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 UBA3Q8TBC4 463 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 ACTRT1Q8TDG2 376 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 DIS3LQ8TF46 1054 aaKnown RBP13.42□□□□□ -0.26
CACNB3-223ENST00000552480 MS4A14Q96JA4 679 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 PAAF1Q9BRP4 392 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 TRIM7Q9C029 511 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 CARD9Q9H257 536 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 SYNCQ9H7C4 482 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 EHD2Q9NZN4 543 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 IP6K2Q9UHH9 426 aa13.42□□□□□ -0.26
CACNB3-223ENST00000552480 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 SIGLEC16A6NMB1 481 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 M0QZQ0 153 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 PGRMC1O00264 195 aaKnown RBP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 CEP104O60308 925 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 GJB6O95452 261 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 CAPN2P17655 700 aa13.41□□□□□ -0.26
CACNB3-223ENST00000552480 IGFBP6P24592 240 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-223ENST00000552480 SNX16P57768 344 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms