RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ADIGQ0VDE8 80 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 TMEM209Q96SK2 561 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 GANQ9H2C0 597 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 MTIF3Q9H2K0 278 aaKnown RBP8.64□□□□□ -1.03
CHPT1-208ENST00000552215 FAM204AQ9H8W3 233 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 L1RE1Q9UN81 338 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 SAR1BQ9Y6B6 198 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 HTTP42858 3142 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 F5P12259 2224 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 TRIP12Q14669 1992 aaPredicted RBP8.64□□□□□ -1.03
CHPT1-208ENST00000552215 SPTLC1O15269 473 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 KIF4AO95239 1232 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 KRT1P04264 644 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 FAAP100Q0VG06 881 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 PPP1R7Q15435 360 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 ERCC6LQ2NKX8 1250 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 SEL1L2Q5TEA6 688 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 DENND2CQ68D51 928 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 FAM131BQ86XD5 332 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 KLHDC9Q8NEP7 349 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 SLC7A14Q8TBB6 771 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 BAP1Q92560 729 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 DHX35Q9H5Z1 703 aaKnown RBP8.64□□□□□ -1.03
CHPT1-208ENST00000552215 STIM2Q9P246 746 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 CITO14578 2027 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 BRWD1Q9NSI6 2320 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 E5RJQ4 531 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 ASS1P00966 412 aaKnown RBP8.64□□□□□ -1.03
CHPT1-208ENST00000552215 FAM200BP0CF97 657 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 HP1BP3Q5SSJ5 553 aaPredicted RBP8.64□□□□□ -1.03
CHPT1-208ENST00000552215 AADACL2Q6P093 401 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 CCDC105Q8IYK2 499 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 KCTD6Q8NC69 237 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 ZNF518BQ9C0D4 1074 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 ELOVL4Q9GZR5 314 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 SIX4Q9UIU6 781 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 A0A0C4DFX4 3053 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 ATAD5Q96QE3 1844 aa8.64□□□□□ -1.03
CHPT1-208ENST00000552215 A0A0U1RQF3 1178 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 MDM4O15151 490 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 DDHD2O94830 711 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 MICAL2O94851 1124 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 URODP06132 367 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 GJA1P17302 382 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 NDUFV1P49821 464 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ITKQ08881 620 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 BMS1Q14692 1282 aaKnown RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ATP13A4Q4VNC1 1196 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 RFX6Q8HWS3 928 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 VPS52Q8N1B4 723 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 FIBCD1Q8N539 461 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 SNX27Q96L92 541 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 PCDHB18PQ96TA0 734 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 HTATIP2Q9BUP3 242 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 TSGA10Q9BZW7 698 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ITGA11Q9UKX5 1188 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 PCDHB12Q9Y5F1 795 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 KRIT1O00522 736 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 NRP1O14786 923 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ENDOD1O94919 500 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 MYL4P12829 197 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ATP2A2P16615 1042 aaKnown RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 AXLP30530 894 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 AP3M2P53677 418 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 MBTPS1Q14703 1052 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 C1orf220Q5T0J3 134 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 BTBD8Q5XKL5 378 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 CCDC170Q8IYT3 715 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 UBL4BQ8N7F7 174 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 CXXC1Q9P0U4 656 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 BARX2Q9UMQ3 279 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 MBLAC1A4D2B0 266 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 TRDMT1O14717 391 aaKnown RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 PRPSAP2O60256 369 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 BUB1BO60566 1050 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 PCSK1P29120 753 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 TKTL1P51854 596 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 FPGSQ05932 587 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ADCY1Q08828 1119 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 TUSC3Q13454 348 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ELF2Q15723 593 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 C15orf59Q2T9L4 293 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 LNX1Q8TBB1 728 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 ZNF333Q96JL9 665 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 CCDC113Q9H0I3 377 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 C10orf88Q9H8K7 445 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 SAGE1Q9NXZ1 904 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 BCCIPQ9P287 314 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 HAS3O00219 553 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 RFXAPO00287 272 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 PTPN1P18031 435 aaKnown RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 SDC4P31431 198 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 RPL7AP62424 266 aaKnown RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 CDR2Q01850 454 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 KYAT1Q16773 422 aa8.63□□□□□ -1.03
CHPT1-208ENST00000552215 CDCA2Q69YH5 1023 aaPredicted RBP8.63□□□□□ -1.03
CHPT1-208ENST00000552215 C1orf228Q6PIY5 440 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms