RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 HNRNPA1P09651 372 aaKnown RBP eCLIP19.91■□□□□ 0.78
DDX54-209ENST00000551912 PTPN1P18031 435 aaKnown RBP19.91■□□□□ 0.78
DDX54-209ENST00000551912 CD58P19256 250 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 TBXAS1P24557 533 aaPredicted RBP19.91■□□□□ 0.78
DDX54-209ENST00000551912 NDST1P52848 882 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 DUSP4Q13115 394 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 CUL2Q13617 745 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 IQCB1Q15051 598 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 EXOC3L4Q17RC7 722 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 PTCRAQ6ISU1 281 aaPredicted RBP19.91■□□□□ 0.78
DDX54-209ENST00000551912 FAM171BQ6P995 826 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 ARID3AQ99856 593 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 PRKD2Q9BZL6 878 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 DPEP3Q9H4B8 488 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 FAM124BQ9H5Z6 455 aaPredicted RBP19.91■□□□□ 0.78
DDX54-209ENST00000551912 CBX8Q9HC52 389 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 CRTAC1Q9NQ79 661 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 ABI2Q9NYB9 513 aaPredicted RBP19.91■□□□□ 0.78
DDX54-209ENST00000551912 HSFX1Q9UBD0 423 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 LIMA1Q9UHB6 759 aaKnown RBP19.91■□□□□ 0.78
DDX54-209ENST00000551912 INSL5Q9Y5Q6 135 aa19.91■□□□□ 0.78
DDX54-209ENST00000551912 MBTPS2O43462 519 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 PAPLNO95428 1278 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 LRG1P02750 347 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 TRIM21P19474 475 aaKnown RBP19.9■□□□□ 0.78
DDX54-209ENST00000551912 CDR1P51861 262 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 YWHAEP62258 255 aaKnown RBP19.9■□□□□ 0.78
DDX54-209ENST00000551912 LRSAM1Q6UWE0 723 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 CYP26C1Q6V0L0 522 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 C4orf50Q6ZRC1 276 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 GPR149Q86SP6 731 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 SPATA2LQ8IUW3 424 aaPredicted RBP19.9■□□□□ 0.78
DDX54-209ENST00000551912 PPM1KQ8N3J5 372 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 B3GALNT2Q8NCR0 500 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 MYCBPAPQ8TBZ2 947 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 RHOBTB2Q9BYZ6 727 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 DNAI2Q9GZS0 605 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 VPS16Q9H269 839 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 CRISPLD1Q9H336 500 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 CISHQ9NSE2 258 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 FAM50BQ9Y247 325 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 SLC27A5Q9Y2P5 690 aa19.9■□□□□ 0.78
DDX54-209ENST00000551912 USP15Q9Y4E8 981 aaPredicted RBP19.9■□□□□ 0.78
DDX54-209ENST00000551912 GRXCR2A6NFK2 248 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 CCL16O15467 120 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 XYLBO75191 536 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 CILPO75339 1184 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 TUFMP49411 452 aaKnown RBP19.89■□□□□ 0.77
DDX54-209ENST00000551912 KCNQ1P51787 676 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 COPB1P53618 953 aaKnown RBP19.89■□□□□ 0.77
DDX54-209ENST00000551912 TPM4P67936 248 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 CCDC142Q17RM4 750 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 MGAT5BQ3V5L5 792 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 MDH1BQ5I0G3 518 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 ATAT1Q5SQI0 421 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 TRIM65Q6PJ69 517 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.89■□□□□ 0.77
DDX54-209ENST00000551912 TTC9BQ8N6N2 239 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 SMG7Q92540 1137 aaKnown RBP19.89■□□□□ 0.77
DDX54-209ENST00000551912 MYLPFQ96A32 169 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 ZNF707Q96C28 371 aaPredicted RBP19.89■□□□□ 0.77
DDX54-209ENST00000551912 FUBP3Q96I24 572 aaKnown RBP eCLIP19.89■□□□□ 0.77
DDX54-209ENST00000551912 RIPOR3Q96MK2 946 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 ASB2Q96Q27 587 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 SEPT5Q99719 369 aaPredicted RBP19.89■□□□□ 0.77
DDX54-209ENST00000551912 NT5C1AQ9BXI3 368 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 TSPY26PQ9H489 355 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 PIDD1Q9HB75 910 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 ABCB6Q9NP58 842 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 HMGXB4Q9UGU5 601 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 YIPF1Q9Y548 306 aa19.89■□□□□ 0.77
DDX54-209ENST00000551912 LRRC10BA6NIK2 292 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 POU2F2P09086 479 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 ATP1A3P13637 1013 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 SLC9A1P19634 815 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 PON1P27169 355 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 MTHFRP42898 656 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 ALDH1A3P47895 512 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 CYP27A1Q02318 531 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 GCNT1Q02742 428 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 TWF1Q12792 350 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 PLD1Q13393 1074 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 CFAP221Q4G0U5 840 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 PHLDB3Q6NSJ2 640 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 RRAGAQ7L523 313 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 ACOT1Q86TX2 421 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 LUZP1Q86V48 1076 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 ARHGEF19Q8IW93 802 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 CRYBG2Q8N1P7 616 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 FAM200AQ8TCP9 573 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 SUSD6Q92537 303 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 PCED1BQ96HM7 432 aa19.88■□□□□ 0.77
DDX54-209ENST00000551912 HAPLN1P10915 354 aaPredicted RBP19.87■□□□□ 0.77
DDX54-209ENST00000551912 ORC1Q13415 861 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 CBX2Q14781 532 aaPredicted RBP19.87■□□□□ 0.77
DDX54-209ENST00000551912 FKBP15Q5T1M5 1219 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 ELMOD1Q8N336 334 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 FEZF2Q8TBJ5 459 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 WHAMMQ8TF30 809 aa19.87■□□□□ 0.77
DDX54-209ENST00000551912 FAM81BQ96LP2 452 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms