RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 TDRD15B5MCY1 1934 aaKnown RBP11.36□□□□□ -0.59
PTCH1-225ENST00000551845 ATG2AQ2TAZ0 1938 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 PLXNA4Q9HCM2 1894 aa11.36□□□□□ -0.59
PTCH1-225ENST00000551845 MTMR11A4FU01 709 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 PMM2O15305 246 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 P4HA2O15460 535 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 CCL16O15467 120 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 PAPLNO95428 1278 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 TRIM21P19474 475 aaKnown RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 ACAT1P24752 427 aaKnown RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 FMO5P49326 533 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 CDH8P55286 799 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 KCNH2Q12809 1159 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 PLD1Q13393 1074 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 MGAT5BQ3V5L5 792 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 CAVIN1Q6NZI2 390 aaKnown RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 OSTM1Q86WC4 334 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 TRIM59Q8IWR1 403 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 ENOX1Q8TC92 643 aaKnown RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 KBTBD7Q8WVZ9 684 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 ZNF707Q96C28 371 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 RPGRIP1Q96KN7 1286 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 MED15Q96RN5 788 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 PI4K2AQ9BTU6 479 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 DNAI2Q9GZS0 605 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 THAP9Q9H5L6 903 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 CYP3A43Q9HB55 503 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 WDR6Q9NNW5 1121 aaKnown RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 MAGEC2Q9UBF1 373 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-225ENST00000551845 COQ4Q9Y3A0 265 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 PCDHB5Q9Y5E4 795 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 KIAA1671Q9BY89 1806 aa11.35□□□□□ -0.59
PTCH1-225ENST00000551845 MYBPHLA2RUH7 354 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 H0Y858 1186 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 AFPP02771 609 aaKnown RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 POU2F2P09086 479 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 PTPN1P18031 435 aaKnown RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 AVPR2P30518 371 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 EPHB3P54753 998 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 VCPP55072 806 aaKnown RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 NOP14P78316 857 aaKnown RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 SIGLEC14Q08ET2 396 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 TWF1Q12792 350 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 STX1AQ16623 288 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 CBWD6Q4V339 395 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 CBWD3Q5JTY5 395 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 CBWD5Q5RIA9 395 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 CYP4A22Q5TCH4 519 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 SPOPLQ6IQ16 392 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 FAM171BQ6P995 826 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 C4orf50Q6ZRC1 276 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 GRASPQ7Z6J2 395 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 UNC93AQ86WB7 457 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 SPATA2LQ8IUW3 424 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 TTC39CQ8N584 583 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 SEMA4DQ92854 862 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 ELMO3Q96BJ8 720 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 ACSF2Q96CM8 615 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 TNIP3Q96KP6 325 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 NAT10Q9H0A0 1025 aaKnown RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.34□□□□□ -0.591e-16■■■■■ 250
PTCH1-225ENST00000551845 ABI2Q9NYB9 513 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-225ENST00000551845 NR2E1Q9Y466 385 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 INSL5Q9Y5Q6 135 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 CITO14578 2027 aa11.34□□□□□ -0.59
PTCH1-225ENST00000551845 ATP2C2O75185 946 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 LRRN2O75325 713 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 HAPLN1P10915 354 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 RPL10AP62906 217 aaKnown RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 TAF12Q16514 161 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 OTOP3Q7RTS5 596 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 EHBP1Q8NDI1 1231 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 MYCBPAPQ8TBZ2 947 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 FAM200AQ8TCP9 573 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 TATDN2Q93075 761 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 FUBP3Q96I24 572 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 SEPT5Q99719 369 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 NIF3L1Q9GZT8 377 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 SMYD3Q9H7B4 428 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 TMLHEQ9NVH6 421 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 DNMT3BQ9UBC3 853 aaKnown RBP11.33□□□□□ -0.6
PTCH1-225ENST00000551845 CDH22Q9UJ99 828 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 USTQ9Y2C2 406 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 ASB3Q9Y575 518 aa11.33□□□□□ -0.6
PTCH1-225ENST00000551845 LOC730098B7Z3J9 87 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 ZNF197O14709 1029 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 HCRTO43612 131 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 VNN2O95498 520 aa11.32□□□□□ -0.6
PTCH1-225ENST00000551845 FSHRP23945 695 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms