RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TRIM60Q495X7 471 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 CCDC178Q5BJE1 867 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 FAM47AQ5JRC9 791 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 PRAMEF19Q5SWL8 479 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 AKNAD1Q5T1N1 836 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TMEM63BQ5T3F8 832 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 MBNL2Q5VZF2 373 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 GRAMD4Q6IC98 578 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 BMP8AQ7Z5Y6 402 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 PLEKHH3Q7Z736 793 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 B3GNT8Q7Z7M8 397 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 DGKHQ86XP1 1220 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 DTX3Q8N9I9 347 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 KYQ8NBH2 561 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 SHCBP1Q8NEM2 672 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 MORC4Q8TE76 937 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 MZB1Q8WU39 189 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 SOCS4Q8WXH5 440 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 BADQ92934 168 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 KCNN1Q92952 543 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 COA7Q96BR5 231 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 EDC3Q96F86 508 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 LIN37Q96GY3 246 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 SLC2A13Q96QE2 648 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TACO1Q9BSH4 297 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 PITHD1Q9GZP4 211 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 UPF3AQ9H1J1 476 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 DHX36Q9H2U1 1008 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 CNTD2Q9H8S5 307 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 C1orf112Q9NSG2 853 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 OBP2AQ9NY56 170 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 KCMF1Q9P0J7 381 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 SAE1Q9UBE0 346 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 MBD1Q9UIS9 605 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 ZFP69BQ9UJL9 534 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 FBXO10Q9UK96 956 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 CROTQ9UKG9 612 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TMPRSS11EQ9UL52 423 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 PLA2G2DQ9UNK4 145 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 RIPK3Q9Y572 518 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 PCDHA5Q9Y5H7 936 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 CDY2AQ9Y6F7 541 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 DDX60LQ5H9U9 1706 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 DNAH14Q0VDD8 3507 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 A0A0A6YYJ9 748 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 A0A0G2JNJ9 132 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 MYOCOSA0A1B0GUC4 107 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 GRXCR1A8MXD5 290 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 H0Y858 1186 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ATP2A1O14983 1001 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 DAPK3O43293 454 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 STRNO43815 780 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 DTNBO60941 627 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SEMA7AO75326 666 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 IL18BPO95998 194 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 GH2P01242 217 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 RPLP2P05387 115 aaKnown RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 CYP2D6P10635 497 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ATF2P15336 505 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 PDCP20941 246 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 LPOP22079 712 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ADORA2AP29274 412 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 PLA2G5P39877 138 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 RGS2P41220 211 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 IRAK1P51617 712 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 CDR1P51861 262 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ITGA1P56199 1179 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 IL13RA1P78552 427 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 CD83Q01151 205 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SEPT2Q15019 361 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 STILQ15468 1287 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 MLANAQ16655 118 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 MAN2A1Q16706 1144 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 MUM1L1Q5H9M0 696 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 GJC2Q5T442 439 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 BTNL9Q6UXG8 535 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 GADL1Q6ZQY3 521 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 PRR23BQ6ZRT6 265 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 USP45Q70EL2 814 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 EPM2AIP1Q7L775 607 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 OTOP2Q7RTS6 562 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 STK32CQ86UX6 486 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SLC41A1Q8IVJ1 513 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 GLB1L2Q8IW92 636 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 STPG3Q8N7X2 389 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 FBXO15Q8NCQ5 510 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SLC44A5Q8NCS7 719 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 MAFAQ8NHW3 353 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SLC35G2Q8TBE7 412 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 HERVK_113Q902F9 699 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ZBTB8AQ96BR9 441 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ZSWIM3Q96MP5 696 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ASB2Q96Q27 587 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 C11orf84Q9BUA3 381 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 ADI1Q9BV57 179 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SENP6Q9GZR1 1112 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SPATC1LQ9H0A9 340 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 SIL1Q9H173 461 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 MAN1C1Q9NR34 630 aa2.81□□□□□ -1.96
CPSF6-207ENST00000551516 Q9UFV3 132 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms