RNA–Protein interactions for RNA: ENST00000551434.5

CNOT2-230, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-230ENST00000551434 KLHDC4Q8TBB5 520 aa3.26□□□□□ -1.89
CNOT2-230ENST00000551434 RPL36ALQ969Q0 106 aaKnown RBP3.26□□□□□ -1.89
CNOT2-230ENST00000551434 C1orf43Q9BWL3 253 aa3.26□□□□□ -1.89
CNOT2-230ENST00000551434 BHMT2Q9H2M3 363 aa3.26□□□□□ -1.89
CNOT2-230ENST00000551434 SMOC2Q9H3U7 446 aa3.26□□□□□ -1.89
CNOT2-230ENST00000551434 SARS2Q9NP81 518 aaKnown RBP3.26□□□□□ -1.89
CNOT2-230ENST00000551434 SH3BP4Q9P0V3 963 aa3.26□□□□□ -1.89
CNOT2-230ENST00000551434 PRSS29PA6NIE9 313 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 PPM1DO15297 605 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 BMP15O95972 392 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 TUBB4AP04350 444 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 POU2F2P09086 479 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 TYRP14679 529 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 CHRM3P20309 590 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 AKAP5P24588 427 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 CYP2C18P33260 490 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 PXNP49023 591 aaPredicted RBP3.25□□□□□ -1.89
CNOT2-230ENST00000551434 CDKN1CP49918 316 aaPredicted RBP3.25□□□□□ -1.89
CNOT2-230ENST00000551434 LOXL3P58215 753 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 TFF2Q03403 129 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 E2F2Q14209 437 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 ODF1Q14990 250 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 PGS1Q32NB8 556 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 LONRF3Q496Y0 759 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 TMEM119Q4V9L6 283 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 PRAMEF17Q5VTA0 474 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 MORN5Q5VZ52 161 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 MTHFD1LQ6UB35 978 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 TMEM108Q6UXF1 575 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 NEK8Q86SG6 692 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 FAM46DQ8NEK8 389 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 ZCRB1Q8TBF4 217 aaKnown RBP3.25□□□□□ -1.89
CNOT2-230ENST00000551434 MTFMTQ96DP5 389 aaKnown RBP3.25□□□□□ -1.89
CNOT2-230ENST00000551434 PTDSS2Q9BVG9 487 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 CNNM1Q9NRU3 951 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 DKK3Q9UBP4 350 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 AGAP1Q9UPQ3 857 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 PLEKHM1Q9Y4G2 1056 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 CADPSQ9ULU8 1353 aa3.25□□□□□ -1.89
CNOT2-230ENST00000551434 SHROOM4Q9ULL8 1493 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 LRRC14BA6NHZ5 514 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 H3BUI4 141 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PPP6CO00743 305 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 IL33O95760 270 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 DLDP09622 509 aaKnown RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 NPSP0C0P6 89 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PIM1P11309 404 aaPredicted RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 CYP2C9P11712 490 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 XRCC6P12956 609 aaKnown RBP eCLIP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 EPHB2P29323 1055 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PPIFP30405 207 aaKnown RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 KCNJ5P48544 419 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PLCD1P51178 756 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PDE1AP54750 535 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 HOXA4Q00056 320 aaPredicted RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 AMPD3Q01432 767 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 MAPK7Q13164 816 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PROSER3Q2NL68 480 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PCID2Q5JVF3 399 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 TMEM240Q5SV17 173 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 EMC10Q5UCC4 262 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 VPS53Q5VIR6 699 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 ZNF626Q68DY1 528 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 SLC9A4Q6AI14 798 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 ZNF782Q6ZMW2 699 aaPredicted RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PARS2Q7L3T8 475 aaKnown RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 LRRC71Q8N4P6 559 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 Q8N9P0 234 aaPredicted RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 RP9Q8TA86 221 aaKnown RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 DENND1AQ8TEH3 1009 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 CDK5RAP3Q96JB5 506 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 SLC46A1Q96NT5 459 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 FCRL4Q96PJ5 515 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 GLOD4Q9HC38 313 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 HESX1Q9UBX0 185 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 SHOC2Q9UQ13 582 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 BTBD3Q9Y2F9 522 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 TBC1D30Q9Y2I9 924 aa3.24□□□□□ -1.89
CNOT2-230ENST00000551434 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.24□□□□□ -1.89
CNOT2-230ENST00000551434 PRRT4C9JH25 899 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 H0YIZ8 118 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 MYO1CO00159 1063 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 MYO1FO00160 1098 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 IKBKBO14920 756 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 ZRANB2O95218 330 aaKnown RBP eCLIP3.23□□□□□ -1.89
CNOT2-230ENST00000551434 LATS1O95835 1130 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 THP07101 528 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 JUPP14923 745 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 LRPAP1P30533 357 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 TOB1P50616 345 aaPredicted RBP3.23□□□□□ -1.89
CNOT2-230ENST00000551434 MAP2K6P52564 334 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 TREML2Q5T2D2 321 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 C11orf87Q6NUJ2 197 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.23□□□□□ -1.89
CNOT2-230ENST00000551434 ZNF366Q8N895 744 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 REPS1Q96D71 796 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 HSPBAP1Q96EW2 488 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 NUP88Q99567 741 aaPredicted RBP3.23□□□□□ -1.89
CNOT2-230ENST00000551434 TTYH3Q9C0H2 523 aa3.23□□□□□ -1.89
CNOT2-230ENST00000551434 SERHLQ9NQF3 203 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms