RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 DDX53Q86TM3 631 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 CCAR2Q8N163 923 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 SLC39A11Q8N1S5 342 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 TET1Q8NFU7 2136 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 LNX1Q8TBB1 728 aaPredicted RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 MYCBPAPQ8TBZ2 947 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 CYFIP2Q96F07 1278 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 RNPC3Q96LT9 517 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 TWNKQ96RR1 684 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 HNRNPABQ99729 332 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 SYT15Q9BQS2 421 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 SPTLC3Q9NUV7 552 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 HMGXB4Q9UGU5 601 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 NENFQ9UMX5 172 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 MICAL3Q7RTP6 2002 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 COL4A6Q14031 1691 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 PDCD11Q14690 1871 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 ANKRD62A6NC57 917 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 BTNL10A8MVZ5 291 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 ESPNB1AK53 854 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 I3L4J1 428 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 PJA2O43164 708 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 EFEMP2O95967 443 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 FTLP02792 175 aaPredicted RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 SOD2P04179 222 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 TMEM253P0C7T8 217 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 UNGP13051 313 aaPredicted RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 TKTP29401 623 aaKnown RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 BCAT1P54687 386 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 CYP27A1Q02318 531 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 CENPCQ03188 943 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 NFE2Q16621 373 aaPredicted RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 IFI16Q16666 785 aaKnown RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 ARHGAP29Q52LW3 1261 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 INTS6LQ5JSJ4 861 aaKnown RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 KIAA1841Q6NSI8 718 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 FAM171BQ6P995 826 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 C4orf50Q6ZRC1 276 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 OSTM1Q86WC4 334 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 PHF13Q86YI8 300 aaPredicted RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 RNF168Q8IYW5 571 aaPredicted RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 ANKRD52Q8NB46 1076 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 STK32AQ8WU08 396 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 C2orf15Q8WU43 125 aaKnown RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 CTNNBL1Q8WYA6 563 aaPredicted RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 TFAP2BQ92481 460 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 SAMD11Q96NU1 681 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 PCDHB18PQ96TA0 734 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 GPR62Q9BZJ7 368 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 UBE2OQ9C0C9 1292 aaKnown RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 ACP6Q9NPH0 428 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 CYLDQ9NQC7 956 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 TSPAN16Q9UKR8 245 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 STRIP2Q9ULQ0 834 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 LZTS1Q9Y250 596 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 TIMM13Q9Y5L4 95 aaPredicted RBP11.03□□□□□ -0.64
NEK3-203ENST00000551355 BACE2Q9Y5Z0 518 aa11.03□□□□□ -0.64
NEK3-203ENST00000551355 A0A0A6YYK5 440 aaPredicted RBP11.02□□□□□ -0.65
NEK3-203ENST00000551355 NT5C1B-RDH14C9J2C7 533 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 F8W810 466 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 M0QYV0 167 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 ZNF263O14978 683 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 MICAL2O94851 1124 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 CALB1P05937 261 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 RB1P06400 928 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 IGFBP6P24592 240 aaPredicted RBP11.02□□□□□ -0.65
NEK3-203ENST00000551355 BMP8BP34820 402 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 NOMO3P69849 1222 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 GPC5P78333 572 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 UBE3AQ05086 875 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 BST2Q10589 180 aaKnown RBP11.02□□□□□ -0.65
NEK3-203ENST00000551355 CTXN3Q4LDR2 81 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 PPP1R26Q5T8A7 1209 aaPredicted RBP11.02□□□□□ -0.65
NEK3-203ENST00000551355 LIN9Q5TKA1 542 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.65
NEK3-203ENST00000551355 CEP57Q86XR8 500 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 RNF10Q8N5U6 811 aaKnown RBP11.02□□□□□ -0.65
NEK3-203ENST00000551355 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 ACRBPQ8NEB7 543 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 OLIG1Q8TAK6 271 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 FUBP3Q96I24 572 aaKnown RBP eCLIP11.02□□□□□ -0.65
NEK3-203ENST00000551355 ZSWIM1Q9BR11 485 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 HERC2P3Q9BVR0 1158 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 UBXN6Q9BZV1 441 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 ZCWPW1Q9H0M4 648 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 DPEP3Q9H4B8 488 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.02□□□□□ -0.65
NEK3-203ENST00000551355 CHST7Q9NS84 486 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 MYO1AQ9UBC5 1043 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 LCMT1Q9UIC8 334 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 MAFFQ9ULX9 164 aa11.02□□□□□ -0.65
NEK3-203ENST00000551355 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
NEK3-203ENST00000551355 PCDHA11Q9Y5I1 949 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms