RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 LOC730098B7Z3J9 87 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 PAPLNO95428 1278 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 RHOP08100 348 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 FAM163BP0C2L3 166 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 HAPLN1P10915 354 aaPredicted RBP14.67□□□□□ -0.06
TROAP-213ENST00000550709 PTPN2P17706 415 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 PTPN1P18031 435 aaKnown RBP14.67□□□□□ -0.06
TROAP-213ENST00000550709 CD58P19256 250 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 CYP2F1P24903 491 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 GBP2P32456 591 aaPredicted RBP14.67□□□□□ -0.06
TROAP-213ENST00000550709 TUFMP49411 452 aaKnown RBP14.67□□□□□ -0.06
TROAP-213ENST00000550709 GPR15P49685 360 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 EPHB3P54753 998 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 CYP27A1Q02318 531 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 SMARCB1Q12824 385 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 LRMPQ12912 555 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 PABPC1LQ4VXU2 614 aaKnown RBP14.67□□□□□ -0.06
TROAP-213ENST00000550709 SDHAF4Q5VUM1 108 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 IQCEQ6IPM2 695 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 IRF2BP1Q8IU81 584 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 HS6ST3Q8IZP7 471 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 TDRD5Q8NAT2 981 aaKnown RBP14.67□□□□□ -0.06
TROAP-213ENST00000550709 SPPL2BQ8TCT7 592 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 GIPC2Q8TF65 315 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 C2orf15Q8WU43 125 aaKnown RBP14.67□□□□□ -0.06
TROAP-213ENST00000550709 MYLPFQ96A32 169 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 PKMYT1Q99640 499 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 NIF3L1Q9GZT8 377 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 ANO10Q9NW15 660 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 HMGXB4Q9UGU5 601 aa14.67□□□□□ -0.06
TROAP-213ENST00000550709 TCF20Q9UGU0 1960 aaKnown RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 N4BP1O75113 896 aaKnown RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 AFPP02771 609 aaKnown RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 MYL4P12829 197 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 BDNFP23560 247 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 MTIF2P46199 727 aaKnown RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 NDST1P52848 882 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 PLD1Q13393 1074 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 TAF12Q16514 161 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 STX1AQ16623 288 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 FAM171BQ6P995 826 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 C11orf57Q6ZUT1 292 aaPredicted RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 OTOP3Q7RTS5 596 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 ACOT1Q86TX2 421 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 SCN4BQ8IWT1 228 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 B3GALNT2Q8NCR0 500 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 ST13P5Q8NFI4 369 aaPredicted RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 ITFG1Q8TB96 612 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 MYCBPAPQ8TBZ2 947 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 ING5Q8WYH8 240 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 ACSF2Q96CM8 615 aaPredicted RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 MYADMQ96S97 322 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 BCO2Q9BYV7 579 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 DNAJC25Q9H1X3 360 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 THAP9Q9H5L6 903 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 MAGEC2Q9UBF1 373 aaPredicted RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 LIMD1Q9UGP4 676 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 COQ4Q9Y3A0 265 aa14.66□□□□□ -0.06
TROAP-213ENST00000550709 MRPS23Q9Y3D9 190 aaKnown RBP14.66□□□□□ -0.06
TROAP-213ENST00000550709 CLDN5O00501 218 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 POU2F2P09086 479 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 ATF6P18850 670 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 MARSP56192 900 aaKnown RBP14.65□□□□□ -0.06
TROAP-213ENST00000550709 TYRO3Q06418 890 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 CETN1Q12798 172 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 VEPH1Q14D04 833 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 MAPRE1Q15691 268 aaKnown RBP14.65□□□□□ -0.06
TROAP-213ENST00000550709 DDR2Q16832 855 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 SLC5A9Q2M3M2 681 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 CYP4A22Q5TCH4 519 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 C4orf50Q6ZRC1 276 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 RNF135Q8IUD6 432 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 STKLD1Q8NE28 680 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 TCEAL4Q96EI5 215 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 PCED1BQ96HM7 432 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 ARID3AQ99856 593 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 CYP3A43Q9HB55 503 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 ASAH2Q9NR71 780 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 USTQ9Y2C2 406 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 PLXNA3P51805 1871 aa14.65□□□□□ -0.06
TROAP-213ENST00000550709 TNFRSF10AO00220 468 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 ASGR2P07307 311 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 GJA1P17302 382 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 KLHL40Q2TBA0 621 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 ZNF394Q53GI3 561 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 CT47A1Q5JQC4 288 aaPredicted RBP14.64□□□□□ -0.07
TROAP-213ENST00000550709 PDZD4Q76G19 769 aaPredicted RBP14.64□□□□□ -0.07
TROAP-213ENST00000550709 DNAJB7Q7Z6W7 309 aaPredicted RBP14.64□□□□□ -0.07
TROAP-213ENST00000550709 FAM114A1Q8IWE2 563 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 TNIP3Q96KP6 325 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 TWNKQ96RR1 684 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 MED10Q9BTT4 135 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 B3GNT5Q9BYG0 378 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 ZNF518BQ9C0D4 1074 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 ZNF334Q9HCZ1 680 aaPredicted RBP14.64□□□□□ -0.07
TROAP-213ENST00000550709 ABCB6Q9NP58 842 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 SAMSN1Q9NSI8 373 aaKnown RBP14.64□□□□□ -0.07
TROAP-213ENST00000550709 HSFX1Q9UBD0 423 aa14.64□□□□□ -0.07
TROAP-213ENST00000550709 NFE2L3Q9Y4A8 694 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms