RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 C1QTNF9P0C862 333 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 CYP2C9P11712 490 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 FDXRP22570 491 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 LILRA4P59901 499 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 BOP1Q14137 746 aaKnown RBP6.66□□□□□ -1.34
HCFC2-204ENST00000550335 MAPKAPK3Q16644 382 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 MGAT5BQ3V5L5 792 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.66□□□□□ -1.34
HCFC2-204ENST00000550335 FAXCQ5TGI0 409 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 TSHZ3Q63HK5 1081 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.66□□□□□ -1.34
HCFC2-204ENST00000550335 CFAP52Q8N1V2 620 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 RILPL2Q969X0 211 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 DACT3Q96B18 629 aaPredicted RBP6.66□□□□□ -1.34
HCFC2-204ENST00000550335 SKA1Q96BD8 255 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 MLXIPQ9HAP2 919 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 RAD54BQ9Y620 910 aa6.66□□□□□ -1.34
HCFC2-204ENST00000550335 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 DNPH1O43598 174 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 B4GALT3O60512 393 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 CNOT4O95628 575 aaKnown RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 FCER1AP12319 257 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 SLURP1P55000 103 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 PIGFQ07326 219 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 ZNF844Q08AG5 666 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 FOXO1Q12778 655 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 ELAVL1Q15717 326 aaKnown RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 ADCK5Q3MIX3 580 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 ARL6IP4Q66PJ3 421 aaKnown RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 LIN54Q6MZP7 749 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 KIAA0408Q6ZU52 694 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 RSRC2Q7L4I2 434 aaKnown RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 TAX1BP1Q86VP1 789 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 C2CD5Q86YS7 1000 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 CCDC28AQ8IWP9 274 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 NAXEQ8NCW5 288 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 AFG1LQ8WV93 481 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 ST8SIA2Q92186 375 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 USP13Q92995 863 aaPredicted RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 PPP2R3CQ969Q6 453 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 GRAMD1AQ96CP6 724 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 BORCS6Q96GS4 357 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 FAM84AQ96KN4 292 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 SENP7Q9BQF6 1050 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 KATNAL1Q9BW62 490 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 PLA2G12BQ9BX93 195 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 REXO4Q9GZR2 422 aaKnown RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 TAF1DQ9H5J8 278 aaPredicted RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 SMC4Q9NTJ3 1288 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 HERC5Q9UII4 1024 aaKnown RBP6.65□□□□□ -1.34
HCFC2-204ENST00000550335 SHOC2Q9UQ13 582 aa6.65□□□□□ -1.34
HCFC2-204ENST00000550335 hCG_1984214I3L0E3 225 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 J3KRW8 73 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 DCLK1O15075 740 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 CKMT1AP12532 417 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 EGR1P18146 543 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 MGAT1P26572 445 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 VIPR2P41587 438 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 PRKAG1P54619 331 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 SIM2Q14190 667 aaPredicted RBP6.64□□□□□ -1.35
HCFC2-204ENST00000550335 CSRP2Q16527 193 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 MFSD5Q6N075 450 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 TAPT1Q6NXT6 567 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 TAF2Q6P1X5 1199 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 MZT2AQ6P582 158 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 DOK3Q7L591 496 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 LINC01356Q8N9X3 169 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 PSD4Q8NDX1 1056 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 NUP133Q8WUM0 1156 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 SEC62Q99442 399 aaKnown RBP6.64□□□□□ -1.35
HCFC2-204ENST00000550335 SLC26A6Q9BXS9 759 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 BRD8Q9H0E9 1235 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 NELFAQ9H3P2 528 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 SEPSECSQ9HD40 501 aaKnown RBP6.64□□□□□ -1.35
HCFC2-204ENST00000550335 RIC8AQ9NPQ8 531 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 GGA3Q9NZ52 723 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 SRP68Q9UHB9 627 aaKnown RBP6.64□□□□□ -1.35
HCFC2-204ENST00000550335 CLCA2Q9UQC9 943 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 HPSEQ9Y251 543 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 MRPS17Q9Y2R5 130 aaKnown RBP6.64□□□□□ -1.35
HCFC2-204ENST00000550335 MTO1Q9Y2Z2 717 aaKnown RBP6.64□□□□□ -1.35
HCFC2-204ENST00000550335 HS3ST4Q9Y661 456 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 AATKQ6ZMQ8 1374 aa6.64□□□□□ -1.35
HCFC2-204ENST00000550335 A0A0B4J269 797 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 EYA2O00167 538 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 ERN1O75460 977 aaKnown RBP6.63□□□□□ -1.35
HCFC2-204ENST00000550335 ACTL6BO94805 426 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 RHOBTB3O94955 611 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 LMNAP02545 664 aaKnown RBP6.63□□□□□ -1.35
HCFC2-204ENST00000550335 ITGA5P08648 1049 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 SPATA31D3P0C874 917 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 MED14OSP0DP75 135 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 RXRAP19793 462 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 AKT1P31749 480 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 DDIT3P35638 169 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 KCNC1P48547 511 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 PXNP49023 591 aaPredicted RBP6.63□□□□□ -1.35
HCFC2-204ENST00000550335 WNT3P56703 355 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 PPP2CBP62714 309 aa6.63□□□□□ -1.35
HCFC2-204ENST00000550335 PPP2CAP67775 309 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms