RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 WASF2Q9Y6W5 498 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 DSG3P32926 999 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 MOGSQ13724 837 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 TXNRD3NBQ6F5E7 133 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 WDR60Q8WVS4 1066 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 C10orf82Q8WW14 230 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 CLPTM1LQ96KA5 538 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 CADM1Q9BY67 442 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 TRIM55Q9BYV6 548 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 DCLRE1BQ9H816 532 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 ATP8B3O60423 1300 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 F8VP50 259 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 NFIBO00712 420 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 MAP3K6O95382 1288 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 SKIP12755 728 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 BGNP21810 368 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 GNA15P30679 374 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 SKIV2L2P42285 1042 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 NR1H3Q13133 447 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 CCNG2Q16589 344 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 HIF1AQ16665 826 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 ACSBG2Q5FVE4 666 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 CFAP157Q5JU67 520 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 PTPRN2Q92932 1015 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 TSSK1BQ9BXA7 367 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 TMEM8AQ9HCN3 771 aa11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 PSMC3IPQ9P2W1 217 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-208ENST00000550150 SLC26A4O43511 780 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 PROSCO94903 275 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 SNUPNO95149 360 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 SP100P23497 879 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 GCAP28676 217 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 YWHAGP61981 247 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 ACVR2BQ13705 512 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 CYP4A22Q5TCH4 519 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 ZCCHC9Q8N567 271 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 CEP170P1Q96L14 293 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 RILPQ96NA2 401 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 GBP5Q96PP8 586 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 SLC13A1Q9BZW2 595 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 TBX20Q9UMR3 447 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 UBE4BO95155 1302 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 LPXNO60711 386 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 CCDC22O60826 627 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 VHLP40337 213 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 NPTX2P47972 431 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 MTMR1Q13613 665 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 ALCAMQ13740 583 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 VGLL4Q14135 290 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 SCARA5Q6ZMJ2 495 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 C4orf50Q6ZRC1 276 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 TEX9Q8N6V9 391 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 LRRN4Q8WUT4 740 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 PAFAH2Q99487 392 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 TMEM120AQ9BXJ8 343 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 PPARGC1AQ9UBK2 798 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 LGALS13Q9UHV8 139 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 LCTP09848 1927 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 WDR81Q562E7 1941 aa11.29□□□□□ -0.6
SMARCC2-208ENST00000550150 FAM237BA0A1B0GVD1 139 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 DNALI1O14645 258 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 TBX10O75333 385 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 MT-ND3P03897 115 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 MYL2P10916 166 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 PGM1P36871 562 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 HMGCS2P54868 508 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 SYDE1Q6ZW31 735 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 RSAD2Q8WXG1 361 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 FGD4Q96M96 766 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 A6NHS1 94 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 MTA2O94776 668 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 USP1O94782 785 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 ETS2P15036 469 aa11.28□□□□□ -0.6
SMARCC2-208ENST00000550150 CACNA2D1P54289 1103 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms