RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 ALDH1A3P47895 512 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 PLD1Q13393 1074 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 MAPRE1Q15691 268 aaKnown RBP20.67■□□□□ 0.9
DDX54-207ENST00000550016 ADHFE1Q8IWW8 467 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 TTC9BQ8N6N2 239 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 WDR6Q9NNW5 1121 aaKnown RBP20.67■□□□□ 0.9
DDX54-207ENST00000550016 ABCB6Q9NP58 842 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 CRTAC1Q9NQ79 661 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 ABI2Q9NYB9 513 aaPredicted RBP20.67■□□□□ 0.9
DDX54-207ENST00000550016 NFE2L3Q9Y4A8 694 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 YIPF1Q9Y548 306 aa20.67■□□□□ 0.9
DDX54-207ENST00000550016 GREB1Q4ZG55 1949 aa20.66■□□□□ 0.9
DDX54-207ENST00000550016 PTPN1P18031 435 aaKnown RBP20.66■□□□□ 0.9
DDX54-207ENST00000550016 CDR1P51861 262 aa20.66■□□□□ 0.9
DDX54-207ENST00000550016 PSMC1P62191 440 aaKnown RBP20.66■□□□□ 0.9
DDX54-207ENST00000550016 TWF1Q12792 350 aa20.66■□□□□ 0.9
DDX54-207ENST00000550016 GRASPQ7Z6J2 395 aaPredicted RBP20.66■□□□□ 0.9
DDX54-207ENST00000550016 ELMOD1Q8N336 334 aa20.66■□□□□ 0.9
DDX54-207ENST00000550016 MYCBPAPQ8TBZ2 947 aa20.66■□□□□ 0.9
DDX54-207ENST00000550016 TATDN2Q93075 761 aa20.66■□□□□ 0.9
DDX54-207ENST00000550016 DNAJC25Q9H1X3 360 aa20.66■□□□□ 0.9
DDX54-207ENST00000550016 SAMSN1Q9NSI8 373 aaKnown RBP20.66■□□□□ 0.9
DDX54-207ENST00000550016 DENND4CQ5VZ89 1909 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 CLUHO75153 1309 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 HAPLN1P10915 354 aaPredicted RBP20.65■□□□□ 0.9
DDX54-207ENST00000550016 PTPN2P17706 415 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 EPHB3P54753 998 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 ZP2Q05996 745 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 MGAT5BQ3V5L5 792 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 C4orf50Q6ZRC1 276 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 UNC93AQ86WB7 457 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 SPATA2LQ8IUW3 424 aaPredicted RBP20.65■□□□□ 0.9
DDX54-207ENST00000550016 B3GALNT2Q8NCR0 500 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 FUBP3Q96I24 572 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDX54-207ENST00000550016 TNIP3Q96KP6 325 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 ZNF512Q96ME7 567 aaPredicted RBP20.65■□□□□ 0.9
DDX54-207ENST00000550016 SEPT5Q99719 369 aaPredicted RBP20.65■□□□□ 0.9
DDX54-207ENST00000550016 NAT10Q9H0A0 1025 aaKnown RBP20.65■□□□□ 0.9
DDX54-207ENST00000550016 HCFC1R1Q9NWW0 138 aa20.65■□□□□ 0.9
DDX54-207ENST00000550016 DNMT3BQ9UBC3 853 aaKnown RBP20.65■□□□□ 0.9
DDX54-207ENST00000550016 KCNJ18B7U540 433 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 NDST1P52848 882 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 INCA1Q0VD86 236 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 KCNJ12Q14500 433 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 MAN2A1Q16706 1144 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 CCDC142Q17RM4 750 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 CFAP221Q4G0U5 840 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 HSP90AA4PQ58FG1 418 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 MDH1BQ5I0G3 518 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 TTC39CQ8N584 583 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 EHBP1Q8NDI1 1231 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 LMO3Q8TAP4 145 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 RPGRIP1Q96KN7 1286 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 NECAB3Q96P71 396 aaPredicted RBP20.64■□□□□ 0.89
DDX54-207ENST00000550016 UHRF1Q96T88 793 aaPredicted RBP20.64■□□□□ 0.89
DDX54-207ENST00000550016 DPEP3Q9H4B8 488 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 FAM124BQ9H5Z6 455 aaPredicted RBP20.64■□□□□ 0.89
DDX54-207ENST00000550016 CEP72Q9P209 647 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 NR2E1Q9Y466 385 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 ASB3Q9Y575 518 aa20.64■□□□□ 0.89
DDX54-207ENST00000550016 ZNF638Q14966 1978 aaKnown RBP20.64■□□□□ 0.89
DDX54-207ENST00000550016 C19orf67A6NJJ6 358 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 SOAT2O75908 522 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 CYP2F1P24903 491 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 EEF1GP26641 437 aaKnown RBP20.63■□□□□ 0.89
DDX54-207ENST00000550016 NTHL1P78549 312 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 MYL5Q02045 173 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 CYP27A1Q02318 531 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 LRMPQ12912 555 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 ANO6Q4KMQ2 910 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 TCP11X2Q5H9J9 407 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 IQCEQ6IPM2 695 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 ACOT1Q86TX2 421 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 CRYBG2Q8N1P7 616 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 MYLPFQ96A32 169 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 PCED1BQ96HM7 432 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 NT5C1BQ96P26 610 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 LPIN3Q9BQK8 851 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 TUBGCP2Q9BSJ2 902 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 DNAI2Q9GZS0 605 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 USTQ9Y2C2 406 aa20.63■□□□□ 0.89
DDX54-207ENST00000550016 SYCE3A1L190 88 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 LOC730098B7Z3J9 87 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 RHOP08100 348 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 PRKCSHP14314 528 aaPredicted RBP20.62■□□□□ 0.89
DDX54-207ENST00000550016 CD58P19256 250 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 TRIM21P19474 475 aaKnown RBP20.62■□□□□ 0.89
DDX54-207ENST00000550016 FSHRP23945 695 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 TBXAS1P24557 533 aaPredicted RBP20.62■□□□□ 0.89
DDX54-207ENST00000550016 MAGEA11P43364 429 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 RPL10AP62906 217 aaKnown RBP20.62■□□□□ 0.89
DDX54-207ENST00000550016 CUL2Q13617 745 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 PABPC1LQ4VXU2 614 aaKnown RBP20.62■□□□□ 0.89
DDX54-207ENST00000550016 CDKAL1Q5VV42 579 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 OTOP3Q7RTS5 596 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 CORO1BQ9BR76 489 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 FUCA2Q9BTY2 467 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 NT5C1AQ9BXI3 368 aa20.62■□□□□ 0.89
DDX54-207ENST00000550016 AVENQ9NQS1 362 aaPredicted RBP20.62■□□□□ 0.89
DDX54-207ENST00000550016 CISHQ9NSE2 258 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms