RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ZNF844Q08AG5 666 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 NFX1Q12986 1120 aaKnown RBP10.55□□□□□ -0.72
RAB5B-206ENST00000549505 SNX17Q15036 470 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 DNAJC24Q6P3W2 148 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 RUFY4Q6ZNE9 571 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 CEP128Q6ZU80 1094 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 ARFGAP1Q8N6T3 406 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 IFT81Q8WYA0 676 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 CCDC102AQ96A19 550 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 TWNKQ96RR1 684 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 SMYD3Q9H7B4 428 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 FAM204AQ9H8W3 233 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 PRDM16Q9HAZ2 1276 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 CHST12Q9NRB3 414 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 VPS18Q9P253 973 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 ITGAVP06756 1048 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 CDKN2BP42772 138 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 RNASE9P60153 205 aaKnown RBP10.55□□□□□ -0.72
RAB5B-206ENST00000549505 MFSD5Q6N075 450 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 TRIM51Q9BSJ1 452 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 OSBPL8Q9BZF1 889 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 ZFYVE28Q9HCC9 887 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 SETD4Q9NVD3 440 aa10.55□□□□□ -0.72
RAB5B-206ENST00000549505 UBQLN1Q9UMX0 589 aaKnown RBP10.55□□□□□ -0.72
RAB5B-206ENST00000549505 THSD7BQ9C0I4 1608 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 hCG_1818297A0A087WSY0 165 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 FLT3P36888 993 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 RPL7AP62424 266 aaKnown RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 LACTBP83111 547 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 MGAT3Q09327 533 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 MYO1EQ12965 1108 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 OASLQ15646 514 aaKnown RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 BNIPLQ7Z465 357 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 FAM76AQ8TAV0 307 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 SLC35B2Q8TB61 432 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 TEKT4Q8WW24 435 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 ROPN1BQ9BZX4 212 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 ROPN1Q9HAT0 212 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 PLAAQ9Y263 795 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 LIASO43766 372 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 NPTXRO95502 500 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 KRT7P08729 469 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 HARSP12081 509 aaKnown RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 AKR1A1P14550 325 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 DNA2P51530 1060 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 ZNF143P52747 638 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 HUNKP57058 714 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 IGBP1P78318 339 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 PDCLQ13371 301 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 WDR72Q3MJ13 1102 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 SGO2Q562F6 1265 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 SPOCD1Q6ZMY3 1216 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 CYP4V2Q6ZWL3 525 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 ANKS1BQ7Z6G8 1248 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 BEST2Q8NFU1 509 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 SLC35F5Q8WV83 523 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 ZMAT2Q96NC0 199 aaKnown RBP10.54□□□□□ -0.72
RAB5B-206ENST00000549505 NT5C1AQ9BXI3 368 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.54□□□□□ -0.723e-7■■■□□ 19.2
RAB5B-206ENST00000549505 CPA4Q9UI42 421 aa10.54□□□□□ -0.72
RAB5B-206ENST00000549505 GOLGA6CA6NDK9 693 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TMEM110-MUSTN1A8MSY1 372 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 SMAPO00193 183 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TJP3O95049 919 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 GOLGA6DP0CG33 693 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CYP2C9P11712 490 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 WARSP23381 471 aaKnown RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 MRPS25P82663 173 aaKnown RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 RASA2Q15283 850 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 MRPL10Q7Z7H8 261 aaKnown RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 DDX42Q86XP3 938 aaKnown RBP eCLIP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CENPIQ92674 756 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CENPTQ96BT3 561 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 SNF8Q96H20 258 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CPXM1Q96SM3 734 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 ZNF408Q9H9D4 720 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 AAASQ9NRG9 546 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 GOLGA6AQ9NYA3 693 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CHORDC1Q9UHD1 332 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 AGAP1Q9UPQ3 857 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 SQORQ9Y6N5 450 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 C17orf102A2RUQ5 167 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 POLR3GO15318 223 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CA12O43570 354 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 XPOTO43592 962 aaKnown RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 ABHD2P08910 425 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 ACTN2P35609 894 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CETN2P41208 172 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TAF1CQ15572 869 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TFDP3Q5H9I0 405 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 CCSAPQ6IQ19 270 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-206ENST00000549505 BBS12Q6ZW61 710 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 TRPV1Q8NER1 839 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 ARL8AQ96BM9 186 aa10.53□□□□□ -0.72
RAB5B-206ENST00000549505 FAF2Q96CS3 445 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms