RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ELOVL4Q9GZR5 314 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 ZCWPW1Q9H0M4 648 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 LUC7LQ9NQ29 371 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 EHD2Q9NZN4 543 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 TRIOBPQ9H2D6 2365 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 I3L4J1 428 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 FSCN2O14926 492 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 LRRN2O75325 713 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 LSM8O95777 96 aaKnown RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 SERPING1P05155 500 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 SETSIPP0DME0 302 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 PTPN1P18031 435 aaKnown RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 ACO1P21399 889 aaKnown RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 HNRNPH3P31942 346 aaKnown RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 CASP14P31944 242 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 PRKCIP41743 596 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 RAP1GAPP47736 663 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 KLK7P49862 253 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 BCAT1P54687 386 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 CDH8P55286 799 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 CDK17Q00537 523 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 TBX2Q13207 712 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 GPR17Q13304 367 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 RAB33AQ14088 237 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 PTPN14Q15678 1187 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 CFAP221Q4G0U5 840 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 RTP2Q5QGT7 225 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 ARHGAP17Q68EM7 881 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 DPY19L2P1Q6NXN4 242 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 VSTM1Q6UX27 236 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 CCDC149Q6ZUS6 474 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 SPATA2LQ8IUW3 424 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 TXLNBQ8N3L3 684 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 LNX1Q8TBB1 728 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 MYCBPAPQ8TBZ2 947 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 BAP1Q92560 729 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 SMARCD1Q96GM5 515 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 FAM84AQ96KN4 292 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 GAS2L1Q99501 681 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 DNAJC7Q99615 494 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 ARID3AQ99856 593 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 PDCL3Q9H2J4 239 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 AFF4Q9UHB7 1163 aaKnown RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 MTUS1Q9ULD2 1270 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 TIMM13Q9Y5L4 95 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 MTCL1Q9Y4B5 1905 aaKnown RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 COL4A4P53420 1690 aaPredicted RBP10.38□□□□□ -0.75
SMARCD1-206ENST00000549274 SSU72P8A0A1W2PR75 194 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 LRRC53A6NM62 1247 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 F8W810 466 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 FOXN3O00409 490 aaPredicted RBP10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 TRIM66O15016 1216 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 GRM6O15303 877 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 AP5Z1O43299 807 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 THAP12O43422 761 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 TBC1D4O60343 1298 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 LILRB3O75022 631 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 IPO7O95373 1038 aaKnown RBP10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 GLUD1P00367 558 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 PDGFRBP09619 1106 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 FAM200BP0CF97 657 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 CD19P15391 556 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 KLRC2P26717 231 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 MAGEA11P43364 429 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 RAD23BP54727 409 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 RPL10AP62906 217 aaKnown RBP10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 KLHL30Q0D2K2 578 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 CNGA2Q16280 664 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 TDRD12Q587J7 1177 aaKnown RBP10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 PLPP4Q5VZY2 271 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 GJB7Q6PEY0 223 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 SLC4A11Q8NBS3 891 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 ZNF461Q8TAF7 563 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 CYFIP2Q96F07 1278 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 HNRNPABQ99729 332 aaKnown RBP10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 MED10Q9BTT4 135 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 ZNF518BQ9C0D4 1074 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 SDCBP2Q9H190 292 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 DEF6Q9H4E7 631 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 PLEKHA4Q9H4M7 779 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 NSUN3Q9H649 340 aaKnown RBP10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 ALG13Q9NP73 1137 aaKnown RBP10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 PNPLA8Q9NP80 782 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 CYLDQ9NQC7 956 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 ABHD10Q9NUJ1 306 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 PCDH10Q9P2E7 1040 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 PCDHGC3Q9UN70 934 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 CDY1Q9Y6F8 540 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 PTPRDP23468 1912 aa10.37□□□□□ -0.75
SMARCD1-206ENST00000549274 C2orf71A6NGG8 1288 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 C2CD2LO14523 706 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 EPHB6O15197 1021 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 CYP26A1O43174 497 aa10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
SMARCD1-206ENST00000549274 ATF2P15336 505 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms