RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 MGAT5BQ3V5L5 792 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 SLC39A12Q504Y0 691 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 HYIQ5T013 277 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 KRT79Q5XKE5 535 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 TRIM68Q6AZZ1 485 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 KCNK18Q7Z418 384 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 MON1AQ86VX9 555 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 RIN3Q8TB24 985 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 SEPT5Q99719 369 aaPredicted RBP14.65□□□□□ -0.06
CDX2-202ENST00000548877 MMTAG2Q9BU76 263 aaKnown RBP14.65□□□□□ -0.06
CDX2-202ENST00000548877 CCSER1Q9C0I3 900 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 TMEM9BQ9NQ34 198 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 KCND2Q9NZV8 630 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 DERAQ9Y315 318 aa14.65□□□□□ -0.06
CDX2-202ENST00000548877 DSPP15924 2871 aaKnown RBP14.64□□□□□ -0.07
CDX2-202ENST00000548877 H0YCG3 227 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 LAD1O00515 517 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 KHNYNO15037 678 aaKnown RBP14.64□□□□□ -0.07
CDX2-202ENST00000548877 OGTO15294 1046 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 ARSAP15289 507 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 PRPHP41219 470 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 NCKAP1LP55160 1127 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 GUCY1B3Q02153 619 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 BFSP1Q12934 665 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 C9orf57Q5W0N0 161 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 LRRTM3Q86VH5 581 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 RASSF3Q86WH2 238 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 MAB21L3Q8N8X9 362 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
CDX2-202ENST00000548877 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 RPLP0P6Q8NHW5 317 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 CCDC26Q8TAB7 109 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 C8orf76Q96K31 380 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 SCNM1Q9BWG6 230 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 ECT2Q9H8V3 914 aa14.64□□□□□ -0.07
CDX2-202ENST00000548877 EVLQ9UI08 416 aaPredicted RBP14.64□□□□□ -0.07
CDX2-202ENST00000548877 PI4KAP42356 2102 aa14.63□□□□□ -0.07
CDX2-202ENST00000548877 TCHHQ07283 1943 aa14.63□□□□□ -0.07
CDX2-202ENST00000548877 USP39Q53GS9 565 aaKnown RBP14.63□□□□□ -0.07
CDX2-202ENST00000548877 CC2D1AQ6P1N0 951 aaPredicted RBP14.63□□□□□ -0.07
CDX2-202ENST00000548877 LRSAM1Q6UWE0 723 aa14.63□□□□□ -0.07
CDX2-202ENST00000548877 CPA6Q8N4T0 437 aa14.63□□□□□ -0.07
CDX2-202ENST00000548877 GIPC2Q8TF65 315 aa14.63□□□□□ -0.07
CDX2-202ENST00000548877 CD101Q93033 1021 aa14.63□□□□□ -0.07
CDX2-202ENST00000548877 RPF1Q9H9Y2 349 aaKnown RBP14.63□□□□□ -0.07
CDX2-202ENST00000548877 CPSF3Q9UKF6 684 aaKnown RBP14.63□□□□□ -0.07
CDX2-202ENST00000548877 NOL7Q9UMY1 257 aaKnown RBP14.63□□□□□ -0.07
CDX2-202ENST00000548877 NEUROG3Q9Y4Z2 214 aa14.63□□□□□ -0.07
CDX2-202ENST00000548877 TNRC6BQ9UPQ9 1833 aaKnown RBP14.63□□□□□ -0.07
CDX2-202ENST00000548877 ANKRD11Q6UB99 2663 aaPredicted RBP14.63□□□□□ -0.07
CDX2-202ENST00000548877 ANAPC1Q9H1A4 1944 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 PLXND1Q9Y4D7 1925 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 A0A0B4J269 797 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 PP2D1A8MPX8 630 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 TOP3BO95985 862 aaKnown RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 TCF3P15923 654 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 SPINK2P20155 84 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 TOB1P50616 345 aaPredicted RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 SLC12A3P55017 1021 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 POU5F1Q01860 360 aaKnown RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 FAM160A1Q05DH4 1040 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 TAF12Q16514 161 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 IL17AQ16552 155 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 NAIF1Q69YI7 327 aaPredicted RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 TXNDC8Q6A555 127 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 JADE1Q6IE81 842 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 THEM5Q8N1Q8 247 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 NBEAQ8NFP9 2946 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 OSCP1Q8WVF1 389 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 MRPS31Q92665 395 aaKnown RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 CNOT6LQ96LI5 555 aaKnown RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 MYRFLQ96LU7 910 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 LLPHQ9BRT6 129 aaKnown RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 TMEM206Q9H813 350 aa14.62□□□□□ -0.07
CDX2-202ENST00000548877 LARSQ9P2J5 1176 aaKnown RBP14.62□□□□□ -0.07
CDX2-202ENST00000548877 FAM221BA6H8Z2 402 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 UPK3BL1B0FP48 263 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 UPK3BL2E5RIL1 263 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 CSH1P0DML2 217 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 CSH2P0DML3 217 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 U2AF2P26368 475 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDX2-202ENST00000548877 NMT1P30419 496 aaKnown RBP14.61□□□□□ -0.07
CDX2-202ENST00000548877 MATR3P43243 847 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDX2-202ENST00000548877 DGKEP52429 567 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 IRX4P78413 519 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 USP4Q13107 963 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 NBR1Q14596 966 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 MTF1Q14872 753 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 ZNF77Q15935 545 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 EML3Q32P44 896 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 METTL23Q86XA0 190 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 DCP1BQ8IZD4 617 aaKnown RBP14.61□□□□□ -0.07
CDX2-202ENST00000548877 OLIG1Q8TAK6 271 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 USP33Q8TEY7 942 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 LEO1Q8WVC0 666 aaPredicted RBP14.61□□□□□ -0.07
CDX2-202ENST00000548877 ATP2A3Q93084 1043 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 TRMT2BQ96GJ1 504 aaKnown RBP14.61□□□□□ -0.07
CDX2-202ENST00000548877 ASB7Q9H672 318 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 MSRB2Q9Y3D2 182 aa14.61□□□□□ -0.07
CDX2-202ENST00000548877 C2CD2Q9Y426 696 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms