RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 SNX25Q9H3E2 840 aa9.33□□□□□ -0.92
SP1-203ENST00000548560 POMKQ9H5K3 350 aa9.33□□□□□ -0.92
SP1-203ENST00000548560 METTL14Q9HCE5 456 aaKnown RBP9.33□□□□□ -0.92
SP1-203ENST00000548560 TMEM8AQ9HCN3 771 aa9.33□□□□□ -0.92
SP1-203ENST00000548560 DDX43Q9NXZ2 648 aaKnown RBP9.33□□□□□ -0.92
SP1-203ENST00000548560 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
SP1-203ENST00000548560 ARMCX3Q9UH62 379 aaPredicted RBP9.33□□□□□ -0.92
SP1-203ENST00000548560 RAPGEFL1Q9UHV5 662 aa9.33□□□□□ -0.92
SP1-203ENST00000548560 L1RE1Q9UN81 338 aa9.33□□□□□ -0.92
SP1-203ENST00000548560 DENND4CQ5VZ89 1909 aa9.33□□□□□ -0.92
SP1-203ENST00000548560 CLUHO75153 1309 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 OBSL1O75147 1896 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 MTMR11A4FU01 709 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 CCL16O15467 120 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 GNA14O95837 355 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 HLA-DRAP01903 254 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 C4BPAP04003 597 aaKnown RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 TRIM21P19474 475 aaKnown RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 PTMSP20962 102 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 BMP6P22004 513 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 SP100P23497 879 aaPredicted RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 GTF2H1P32780 548 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 GCLMP48507 274 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 ZP2Q05996 745 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 GPR17Q13304 367 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 NFE2Q16621 373 aaPredicted RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 SGSM1Q2NKQ1 1148 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 KRT39Q6A163 491 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 TTI2Q6NXR4 508 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 RNF19BQ6ZMZ0 732 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 SV2AQ7L0J3 742 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 ZC3H3Q8IXZ2 948 aaKnown RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 TCEAL8Q8IYN2 117 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 OR10T2Q8NGX3 314 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 GPT2Q8TD30 523 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 C2orf15Q8WU43 125 aaKnown RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 TAF4BQ92750 862 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 ACSF2Q96CM8 615 aaPredicted RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 RPGRIP1Q96KN7 1286 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 NECAB3Q96P71 396 aaPredicted RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 ACBD6Q9BR61 282 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 RHOBTB2Q9BYZ6 727 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 ZCWPW1Q9H0M4 648 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
SP1-203ENST00000548560 RWDD2AQ9UIY3 292 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 CDH22Q9UJ99 828 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 INSL5Q9Y5Q6 135 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 MYO10Q9HD67 2058 aa9.32□□□□□ -0.92
SP1-203ENST00000548560 GREB1Q4ZG55 1949 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 NOTCH4Q99466 2003 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 N4BP1O75113 896 aaKnown RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 CST3P01034 146 aaPredicted RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 POU2F2P09086 479 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 CCDC192P0DO97 292 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 WARSP23381 471 aaKnown RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 ACAT1P24752 427 aaKnown RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 GBP2P32456 591 aaPredicted RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 ALDH1A3P47895 512 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 EPHB3P54753 998 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 NLRP12P59046 1061 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 NOP14P78316 857 aaKnown RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 TWF1Q12792 350 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 VEPH1Q14D04 833 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 MAPRE1Q15691 268 aaKnown RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 SOWAHAQ2M3V2 549 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 MGAT5BQ3V5L5 792 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 CCDC183Q5T5S1 534 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 IQCEQ6IPM2 695 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 SASS6Q6UVJ0 657 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 SCARA5Q6ZMJ2 495 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 GET4Q7L5D6 327 aaPredicted RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 OTOP3Q7RTS5 596 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 FRMD5Q7Z6J6 570 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 FILIP1Q7Z7B0 1213 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 GJD3Q8N144 294 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 FBXL13Q8NEE6 735 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 OR6B3Q8NGW1 331 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 SPPL2BQ8TCT7 592 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 ZNF707Q96C28 371 aaPredicted RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 TMEM209Q96SK2 561 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 SEPT5Q99719 369 aaPredicted RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 SYT15Q9BQS2 421 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 DNAI2Q9GZS0 605 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 XYLT2Q9H1B5 865 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 VRTNQ9H8Y1 702 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 WDR6Q9NNW5 1121 aaKnown RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 ABI2Q9NYB9 513 aaPredicted RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 CDH9Q9ULB4 789 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 YIPF1Q9Y548 306 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 PCDHB5Q9Y5E4 795 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 NUP210Q8TEM1 1887 aaPredicted RBP9.31□□□□□ -0.92
SP1-203ENST00000548560 MYO16Q9Y6X6 1858 aa9.31□□□□□ -0.92
SP1-203ENST00000548560 C5orf42Q9H799 3197 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 A8MXQ7 604 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 GABRDO14764 452 aa9.3□□□□□ -0.92
SP1-203ENST00000548560 TACC1O75410 805 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms