RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 DSEQ9UL01 958 aa12.9□□□□□ -0.34
TRAFD1-205ENST00000548277 INVSQ9Y283 1065 aa12.9□□□□□ -0.34
TRAFD1-205ENST00000548277 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-205ENST00000548277 KIAA1549LQ6ZVL6 1849 aa12.9□□□□□ -0.34
TRAFD1-205ENST00000548277 CEP192Q8TEP8 1941 aa12.9□□□□□ -0.35
TRAFD1-205ENST00000548277 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 DCLK1O15075 740 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 HMGA1P17096 107 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 ACAT1P24752 427 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 ARL6IP4Q66PJ3 421 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 EFCAB13Q8IY85 973 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 DCP1BQ8IZD4 617 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 KCTD17Q8N5Z5 321 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 RAD54LQ92698 747 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 FAM84AQ96KN4 292 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 TSPAN18Q96SJ8 248 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 FIZ1Q96SL8 496 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 FAM83CQ9BQN1 747 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 HSFX1Q9UBD0 423 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 KIF3AQ9Y496 699 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 PCDHB5Q9Y5E4 795 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 HELZP42694 1942 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 MYH10P35580 1976 aa12.89□□□□□ -0.35
TRAFD1-205ENST00000548277 ADAMTS9Q9P2N4 1935 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 HCRTO43612 131 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 ATG13O75143 517 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 ZNF806P0C7X5 589 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 CYP2F1P24903 491 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 WEE1P30291 646 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 WNT7BP56706 349 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 GTF2BQ00403 316 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 SV2CQ496J9 727 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 STPG1Q5TH74 334 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 TCEAL6Q6IPX3 200 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 CRELD2Q6UXH1 353 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 RPLP0P6Q8NHW5 317 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 MRPS31Q92665 395 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 TCEAL3Q969E4 200 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 TMX3Q96JJ7 454 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 FAM213AQ9BRX8 229 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 ASB7Q9H672 318 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 RALYQ9UKM9 306 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 DERAQ9Y315 318 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 PI4KAP42356 2102 aa12.88□□□□□ -0.35
TRAFD1-205ENST00000548277 ACACBO00763 2458 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 GOLGA8IPA6NC78 632 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 GOLGA8JA6NMD2 632 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 TRDMT1O14717 391 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 EPN2O95208 641 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 CD2BP2O95400 341 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 KRT19P08727 400 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 POLR2BP30876 1174 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 HOXA6P31267 233 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 GJA4P35212 333 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 ZNF131P52739 623 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 TSPY1Q01534 308 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 CREB5Q02930 508 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 KCNA1Q09470 495 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 CCDC142Q17RM4 750 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 SLFN12LQ6IEE8 588 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 TTC30AQ86WT1 665 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 SCN4BQ8IWT1 228 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 KRI1Q8N9T8 703 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 C2orf15Q8WU43 125 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 LARP4BQ92615 738 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 AK8Q96MA6 479 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 P2RY13Q9BPV8 354 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 DDX43Q9NXZ2 648 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 WNT6Q9Y6F9 365 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 PTPRDP23468 1912 aa12.87□□□□□ -0.35
TRAFD1-205ENST00000548277 GON4LQ3T8J9 2241 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 ANTXRLA6NF34 631 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 ITGB3P05106 788 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 CSH1P0DML2 217 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 CSH2P0DML3 217 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 PAX3P23760 479 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 GBP1P32455 592 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 DDIT3P35638 169 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 MPLP40238 635 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 DGKEP52429 567 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 SEC13P55735 322 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 SMARCB1Q12824 385 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 SF3A1Q15459 793 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 PLK5Q496M5 336 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms