RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 SOX4Q06945 474 aaPredicted RBP18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 GLRA4Q5JXX5 417 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 LLGL2Q6P1M3 1020 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 SLC39A4Q6P5W5 647 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 NOA1Q8NC60 698 aaKnown RBP18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 TMC2Q8TDI7 906 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 SLC22A17Q8WUG5 538 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 B3GALT6Q96L58 329 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 ZMAT2Q96NC0 199 aaKnown RBP18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 RPS6KC1Q96S38 1066 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 PNKPQ96T60 521 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 RHOXF2Q9BQY4 288 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 HERC2P3Q9BVR0 1158 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 TLR10Q9BXR5 811 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 KIAA1586Q9HCI6 787 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 HSPBP1Q9NZL4 362 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 TBX20Q9UMR3 447 aa18.43■□□□□ 0.54
RBFOX1-207ENST00000547338 PDCD11Q14690 1871 aaKnown RBP18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 CITO14578 2027 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 CASTOR2A6NHX0 329 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 FAM189A1O60320 539 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 TOM1L1O75674 476 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 CLSTN1O94985 981 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 KIF4AO95239 1232 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 PLA2G4AP47712 749 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 OSTNP61366 133 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 ARID5AQ03989 594 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 ZP2Q05996 745 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 MCL1Q07820 350 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 SEZ6Q53EL9 994 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 KIAA0319Q5VV43 1072 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 ANKRD54Q6NXT1 300 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 CD300LGQ6UXG3 332 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 ZPBP2Q6X784 338 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 SLC30A5Q8TAD4 765 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 SNX27Q96L92 541 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 EPC1Q9H2F5 836 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 IKZF4Q9H2S9 585 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 CHST7Q9NS84 486 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 CDH22Q9UJ99 828 aa18.42■□□□□ 0.54
RBFOX1-207ENST00000547338 VWA8A3KMH1 1905 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 SRGAP2O75044 1071 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 PIGRP01833 764 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 THP07101 528 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 CNPP09543 421 aaKnown RBP18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 EPCAMP16422 314 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 GARTP22102 1010 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 STRN3Q13033 797 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 DRAP1Q14919 205 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 TCEAL1Q15170 157 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 TMEM130Q8N3G9 435 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 SPATA4Q8NEY3 305 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 LMO3Q8TAP4 145 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 SUSD6Q92537 303 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 TAF4BQ92750 862 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 SELENOOQ9BVL4 669 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 ANKFY1Q9P2R3 1169 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 ADAM28Q9UKQ2 775 aa18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 USP15Q9Y4E8 981 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-207ENST00000547338 PLXNA3P51805 1871 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 SMIM28A0A1B0GU29 152 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 C19orf67A6NJJ6 358 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 PALMO75781 387 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 HARSP12081 509 aaKnown RBP18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 VSNL1P62760 191 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 ZBTB41Q5SVQ8 909 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 FUT10Q6P4F1 479 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 CAPZA3Q96KX2 299 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 FBXL18Q96ME1 805 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 KLHL5Q96PQ7 755 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 COLEC11Q9BWP8 271 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 GOLGA2P5Q9HBQ8 144 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 ABCB6Q9NP58 842 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 SALL4Q9UJQ4 1053 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 COQ4Q9Y3A0 265 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 TRIOO75962 3097 aa18.4■□□□□ 0.54
RBFOX1-207ENST00000547338 TISP43B9A030 160 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 SEC31AO94979 1220 aaKnown RBP18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 TMEM253P0C7T8 217 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 TNFRSF8P28908 595 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 APBA1Q02410 837 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 DSG1Q02413 1049 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 RPS6KA1Q15418 735 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 SLC10A6Q3KNW5 377 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 CBWD6Q4V339 395 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 CBWD3Q5JTY5 395 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 CBWD5Q5RIA9 395 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 SLFN11Q7Z7L1 901 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 C3orf58Q8NDZ4 430 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 HASPINQ8TF76 798 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 ARID3AQ99856 593 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 SYT11Q9BT88 431 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 CNTN3Q9P232 1028 aa18.39■□□□□ 0.54
RBFOX1-207ENST00000547338 ANKRD63C9JTQ0 380 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 PDE2AO00408 941 aaPredicted RBP18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 C2CD2LO14523 706 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 BUB1O43683 1085 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 TNFAIP3P21580 790 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 CA8P35219 290 aa18.39■□□□□ 0.53
RBFOX1-207ENST00000547338 TNFSF9P41273 254 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms