RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 NEK11Q8NG66 645 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 PGLYRP2Q96PD5 576 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 TWNKQ96RR1 684 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 PKMYT1Q99640 499 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 PLEKHA4Q9H4M7 779 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 FBXW11Q9UKB1 542 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 MAFFQ9ULX9 164 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 PCDHB4Q9Y5E5 795 aa24.69■■□□□ 1.54
SMARCD1-203ENST00000547247 CBFA2T2O43439 604 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 SRGAP2BP0DMP2 458 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 ACO1P21399 889 aaKnown RBP24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 ELF1P32519 619 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 PLCB2Q00722 1185 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 ADCY1Q08828 1119 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 ORC1Q13415 861 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 ADAM15Q13444 863 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 ELMSAN1Q6PJG2 1045 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 VN1R2Q8NFZ6 395 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 MYCBPAPQ8TBZ2 947 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 C2orf15Q8WU43 125 aaKnown RBP24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 HDAC7Q8WUI4 952 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 CASP10Q92851 521 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 ELOVL4Q9GZR5 314 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 TMLHEQ9NVH6 421 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 DAAM1Q9Y4D1 1078 aa24.68■■□□□ 1.54
SMARCD1-203ENST00000547247 MTMR11A4FU01 709 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 LINC01565O15544 149 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 RBM10P98175 930 aaKnown RBP24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 MDH1BQ5I0G3 518 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 IQCEQ6IPM2 695 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 TMEM270Q6UE05 265 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 TMEM184AQ6ZMB5 413 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 SPPL2BQ8TCT7 592 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 PABPC5Q96DU9 382 aaKnown RBP24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 TMEM176AQ96HP8 235 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 XPO4Q9C0E2 1151 aaKnown RBP24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 GANQ9H2C0 597 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 MAN1C1Q9NR34 630 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 PCDHB5Q9Y5E4 795 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 FHOD1Q9Y613 1164 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 PLXNA3P51805 1871 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 NOL4O94818 638 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 GLP2RO95838 553 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 RAD23BP54727 409 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 COL19A1Q14993 1142 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 PTPN21Q16825 1174 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 CCDC142Q17RM4 750 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 CTC1Q2NKJ3 1217 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 C4orf50Q6ZRC1 276 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 ATAD1Q8NBU5 361 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 CYP4F11Q9HBI6 524 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 CLDND1Q9NY35 253 aa24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 AJAP1Q9UKB5 411 aaPredicted RBP24.67■■□□□ 1.54
SMARCD1-203ENST00000547247 CDR1P51861 262 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 POLR2FP61218 127 aaKnown RBP24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 RAPGEF1Q13905 1077 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 SKIV2LQ15477 1246 aaKnown RBP24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 LIN9Q5TKA1 542 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 SMYD5Q6GMV2 418 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 SARM1Q6SZW1 724 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 SPATA2LQ8IUW3 424 aaPredicted RBP24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 TCEAL8Q8IYN2 117 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 SLC4A11Q8NBS3 891 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 SHC3Q92529 594 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 MYLPFQ96A32 169 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 PCED1BQ96HM7 432 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 LPIN3Q9BQK8 851 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 NAA15Q9BXJ9 866 aaKnown RBP24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 ABI2Q9NYB9 513 aaPredicted RBP24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 CNTN6Q9UQ52 1028 aa24.66■■□□□ 1.54
SMARCD1-203ENST00000547247 SPDYE4A6NLX3 237 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 PRRG1O14668 218 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 EPHB6O15197 1021 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 VNN2O95498 520 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 KRT5P13647 590 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 DUSP4Q13115 394 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 UVSSAQ2YD98 709 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 EP400NLQ6ZTU2 488 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 CCDC149Q6ZUS6 474 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 RTL10Q7L3V2 364 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 RBBP8NLQ8NC74 664 aaPredicted RBP24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 FUBP3Q96I24 572 aaKnown RBP eCLIP24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 HEXIM2Q96MH2 286 aaKnown RBP24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 DZANK1Q9NVP4 752 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 HSFX1Q9UBD0 423 aa24.65■■□□□ 1.54
SMARCD1-203ENST00000547247 SEC24AO95486 1093 aa24.64■■□□□ 1.54
SMARCD1-203ENST00000547247 CYP27A1Q02318 531 aa24.64■■□□□ 1.54
SMARCD1-203ENST00000547247 DRAP1Q14919 205 aaPredicted RBP24.64■■□□□ 1.54
SMARCD1-203ENST00000547247 CFAP221Q4G0U5 840 aa24.64■■□□□ 1.54
SMARCD1-203ENST00000547247 C12orf29Q8N999 325 aa24.64■■□□□ 1.54
SMARCD1-203ENST00000547247 STK33Q9BYT3 514 aa24.64■■□□□ 1.54
SMARCD1-203ENST00000547247 ABCB6Q9NP58 842 aa24.64■■□□□ 1.54
SMARCD1-203ENST00000547247 MTCL1Q9Y4B5 1905 aaKnown RBP24.64■■□□□ 1.53
SMARCD1-203ENST00000547247 RNF225M0QZC1 329 aaPredicted RBP24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 C8AP07357 584 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 PAEPP09466 180 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 PBX1P40424 430 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 SLC7A14Q8TBB6 771 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 TRIM5Q9C035 493 aa24.63■■□□□ 1.53
SMARCD1-203ENST00000547247 CRISPLD1Q9H336 500 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms