RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MTMR3Q13615 1198 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 DGKDQ16760 1214 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ZNF792Q3KQV3 632 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 IZUMO3Q5VZ72 239 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 C1orf228Q6PIY5 440 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ILDR2Q71H61 639 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 PNMA8AQ86V59 439 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 GDAP1Q8TB36 358 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 TRIM11Q96F44 468 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 MAGEB5Q9BZ81 275 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 DCLK3Q9C098 648 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 CDC42EP4Q9H3Q1 356 aaKnown RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 IP6K2Q9UHH9 426 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 FAM187AA6NFU0 413 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ABLIM1O14639 778 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 PMM2O15305 246 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 MICAL2O94851 1124 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ERBB2P04626 1255 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 IGFBP6P24592 240 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ACAT1P24752 427 aaKnown RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 RAD23BP54727 409 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 SIX1Q15475 284 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 FAXCQ5TGI0 409 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 NPNTQ6UXI9 565 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ZNF677Q86XU0 584 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 TNFSF13BQ9Y275 285 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 RRP15Q9Y3B9 282 aaKnown RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 NR2E3Q9Y5X4 410 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 E5RJQ4 531 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 RASGRF2O14827 1237 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 MEFVO15553 781 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 PGK1P00558 417 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 LCP1P13796 627 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 TNFRSF8P28908 595 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 CLDN10P78369 228 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 GAD2Q05329 585 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 IFRD2Q12894 506 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ZNF618Q5T7W0 954 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 MRPL45Q9BRJ2 306 aaKnown RBP13.42□□□□□ -0.26
SCAF11-209ENST00000547018 VPS37BQ9H9H4 285 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 SAYSD1Q9NPB0 183 aa13.42□□□□□ -0.26
SCAF11-209ENST00000547018 LOXHD1Q8IVV2 1947 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 IGKV6-21A0A0C4DH24 114 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 EIF3HO15372 352 aaKnown RBP eCLIP13.41□□□□□ -0.261e-8■■■□□ 15.2
SCAF11-209ENST00000547018 TSPAN1O60635 241 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 CALB1P05937 261 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 MMP3P08254 477 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 VIMP08670 466 aaKnown RBP13.41□□□□□ -0.26
SCAF11-209ENST00000547018 IL1R2P27930 398 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 NUMBP49757 651 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 ZKSCAN8Q15776 578 aaPredicted RBP13.41□□□□□ -0.26
SCAF11-209ENST00000547018 ZNF484Q5JVG2 852 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 CDCA2Q69YH5 1023 aaPredicted RBP13.41□□□□□ -0.26
SCAF11-209ENST00000547018 CPLX4Q7Z7G2 160 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 PABPC3Q9H361 631 aaKnown RBP13.41□□□□□ -0.26
SCAF11-209ENST00000547018 TSPAN16Q9UKR8 245 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 TRIP11Q15643 1979 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 LCTP09848 1927 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 TRIP12Q14669 1992 aaPredicted RBP13.41□□□□□ -0.26
SCAF11-209ENST00000547018 TMEM191CA6NGB0 347 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 A8MXQ7 604 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 MYBL1P10243 752 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 PDGFRAP16234 1089 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 ABCD1P33897 745 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 IFT88Q13099 833 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 OLFML2BQ68BL8 750 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 PLEKHA7Q6IQ23 1121 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 TRIM72Q6ZMU5 477 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 SLC4A11Q8NBS3 891 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 ZFP42Q96MM3 310 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 CFAP57Q96MR6 1250 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 DPEP3Q9H4B8 488 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 FLRT1Q9NZU1 646 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
SCAF11-209ENST00000547018 H0YGN5 161 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 FSCN2O14926 492 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 RNF8O76064 485 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 CCDC130P13994 396 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 HSPA6P17066 643 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 MDH1P40925 334 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 ATXN1P54253 815 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 FASTKD3Q14CZ7 662 aaKnown RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 ATL2Q8NHH9 583 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PPTC7Q8NI37 304 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 TMEM176AQ96HP8 235 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 FAM81BQ96LP2 452 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 PTPRHQ9HD43 1115 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 AVENQ9NQS1 362 aaPredicted RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 NFS1Q9Y697 457 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 HMGB1P1B2RPK0 211 aaPredicted RBP13.4□□□□□ -0.26
SCAF11-209ENST00000547018 RECQL4O94761 1208 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 CDH6P55285 790 aa13.4□□□□□ -0.26
SCAF11-209ENST00000547018 BASP1P80723 227 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms