RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NFE2Q16621 373 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-211ENST00000545998 RARS2Q5T160 578 aaKnown RBP21.85■■□□□ 1.09
HMGA2-211ENST00000545998 LUZP1Q86V48 1076 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 ANKRD20A12PQ8NF67 263 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 FEZF2Q8TBJ5 459 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 C2orf15Q8WU43 125 aaKnown RBP21.85■■□□□ 1.09
HMGA2-211ENST00000545998 APOL5Q9BWW9 433 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 FAM124BQ9H5Z6 455 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-211ENST00000545998 CISHQ9NSE2 258 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 PES1O00541 588 aaKnown RBP21.84■■□□□ 1.09
HMGA2-211ENST00000545998 PRRG1O14668 218 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 CILPO75339 1184 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 PTPN1P18031 435 aaKnown RBP21.84■■□□□ 1.09
HMGA2-211ENST00000545998 CD58P19256 250 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 SLC9A1P19634 815 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 TBXAS1P24557 533 aaPredicted RBP21.84■■□□□ 1.09
HMGA2-211ENST00000545998 HOXA9P31269 272 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 COPB1P53618 953 aaKnown RBP21.84■■□□□ 1.09
HMGA2-211ENST00000545998 ZNF445P59923 1031 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 ITIH3Q06033 890 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 PHLDB3Q6NSJ2 640 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 TRIM65Q6PJ69 517 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 TMC5Q6UXY8 1006 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 ARHGEF19Q8IW93 802 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 B3GALNT2Q8NCR0 500 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.84■■□□□ 1.09
HMGA2-211ENST00000545998 FAM200AQ8TCP9 573 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 SPPL2BQ8TCT7 592 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 ADAM7Q9H2U9 754 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 TSPY26PQ9H489 355 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 HSFX1Q9UBD0 423 aa21.84■■□□□ 1.09
HMGA2-211ENST00000545998 CCDC195A0A1B0GUA6 201 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 TPM2P07951 284 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 PON1P27169 355 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 GCNT1Q02742 428 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 SMAD4Q13485 552 aaKnown RBP21.83■■□□□ 1.09
HMGA2-211ENST00000545998 MAPRE1Q15691 268 aaKnown RBP21.83■■□□□ 1.09
HMGA2-211ENST00000545998 PPM1LQ5SGD2 360 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 PPM1KQ8N3J5 372 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 TTC39CQ8N584 583 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 TTC9BQ8N6N2 239 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 MYCBPAPQ8TBZ2 947 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 WHAMMQ8TF30 809 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 ZNF707Q96C28 371 aaPredicted RBP21.83■■□□□ 1.09
HMGA2-211ENST00000545998 TNIP3Q96KP6 325 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 TWNKQ96RR1 684 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 LPIN3Q9BQK8 851 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 ABI2Q9NYB9 513 aaPredicted RBP21.83■■□□□ 1.09
HMGA2-211ENST00000545998 SLC27A5Q9Y2P5 690 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 PCDHB5Q9Y5E4 795 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 INSL5Q9Y5Q6 135 aa21.83■■□□□ 1.09
HMGA2-211ENST00000545998 HNRNPA1P09651 372 aaKnown RBP eCLIP21.82■■□□□ 1.08
HMGA2-211ENST00000545998 MDH1BQ5I0G3 518 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 RRAGAQ7L523 313 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 CRYBG2Q8N1P7 616 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 UBR7Q8N806 425 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 ATXN2LQ8WWM7 1075 aaKnown RBP21.82■■□□□ 1.08
HMGA2-211ENST00000545998 KAT5Q92993 513 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 MYLPFQ96A32 169 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 RHOBTB2Q9BYZ6 727 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 PRKD2Q9BZL6 878 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 GRXCR2A6NFK2 248 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 MBTPS2O43462 519 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 SLC34A2O95436 690 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 KCNMA1Q12791 1236 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 ORC1Q13415 861 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 CFAP221Q4G0U5 840 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 GPR149Q86SP6 731 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 ACOT1Q86TX2 421 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 SUSD6Q92537 303 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 PCED1BQ96HM7 432 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 FUBP3Q96I24 572 aaKnown RBP eCLIP21.82■■□□□ 1.08
HMGA2-211ENST00000545998 NT5C1AQ9BXI3 368 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 ELOVL4Q9GZR5 314 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 ABCB6Q9NP58 842 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 YIPF1Q9Y548 306 aa21.82■■□□□ 1.08
HMGA2-211ENST00000545998 LGALS16A8MUM7 142 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 POU2F2P09086 479 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 HAPLN1P10915 354 aaPredicted RBP21.81■■□□□ 1.08
HMGA2-211ENST00000545998 YWHAEP62258 255 aaKnown RBP21.81■■□□□ 1.08
HMGA2-211ENST00000545998 APBA1Q02410 837 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 AAK1Q2M2I8 961 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 PTCRAQ6ISU1 281 aaPredicted RBP21.81■■□□□ 1.08
HMGA2-211ENST00000545998 CES5AQ6NT32 575 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 DPY19L2P1Q6NXN4 242 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 CYP26C1Q6V0L0 522 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 C4orf50Q6ZRC1 276 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 KREMEN1Q96MU8 473 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 SIX2Q9NPC8 291 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 APEX2Q9UBZ4 518 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 CDH22Q9UJ99 828 aa21.81■■□□□ 1.08
HMGA2-211ENST00000545998 USP15Q9Y4E8 981 aaPredicted RBP21.81■■□□□ 1.08
HMGA2-211ENST00000545998 CCL16O15467 120 aa21.8■■□□□ 1.08
HMGA2-211ENST00000545998 ACO1P21399 889 aaKnown RBP21.8■■□□□ 1.08
HMGA2-211ENST00000545998 TUFMP49411 452 aaKnown RBP21.8■■□□□ 1.08
HMGA2-211ENST00000545998 MRPS5P82675 430 aaKnown RBP21.8■■□□□ 1.08
HMGA2-211ENST00000545998 TWF1Q12792 350 aa21.8■■□□□ 1.08
HMGA2-211ENST00000545998 PUS10Q3MIT2 529 aaKnown RBP21.8■■□□□ 1.08
HMGA2-211ENST00000545998 SPATA2LQ8IUW3 424 aaPredicted RBP21.8■■□□□ 1.08
HMGA2-211ENST00000545998 UBE2TQ9NPD8 197 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms