RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
USP28-212ENST00000544750 DSPP15924 2871 aaKnown RBP13.89□□□□□ -0.19
USP28-212ENST00000544750 ADAMTS9Q9P2N4 1935 aa13.89□□□□□ -0.19
USP28-212ENST00000544750 CDX4O14627 284 aaPredicted RBP13.88□□□□□ -0.19
USP28-212ENST00000544750 OGTO15294 1046 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 RHOBTB1O94844 696 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 PIGRP01833 764 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 CSRP1P21291 193 aaKnown RBP13.88□□□□□ -0.19
USP28-212ENST00000544750 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP28-212ENST00000544750 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP28-212ENST00000544750 NMT1P30419 496 aaKnown RBP13.88□□□□□ -0.19
USP28-212ENST00000544750 PRPHP41219 470 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 CDR1P51861 262 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 SLC12A3P55017 1021 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 CREB5Q02930 508 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 ZNF268Q14587 947 aaPredicted RBP13.88□□□□□ -0.19
USP28-212ENST00000544750 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
USP28-212ENST00000544750 ELF2Q15723 593 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 KYAT1Q16773 422 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 SH3PXD2AQ5TCZ1 1133 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 PMS2CLQ68D20 193 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 JADE1Q6IE81 842 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 SLC39A4Q6P5W5 647 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 RPLP0P6Q8NHW5 317 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 SPPL2BQ8TCT7 592 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 GIPC2Q8TF65 315 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 GCNAQ96QF7 691 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 P2RY13Q9BPV8 354 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
USP28-212ENST00000544750 RPF1Q9H9Y2 349 aaKnown RBP13.88□□□□□ -0.19
USP28-212ENST00000544750 CPSF3Q9UKF6 684 aaKnown RBP13.88□□□□□ -0.19
USP28-212ENST00000544750 NBEAQ8NFP9 2946 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 A0A0B4J269 797 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 LAD1O00515 517 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 TADA3O75528 432 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
USP28-212ENST00000544750 APBB3O95704 486 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 NFICP08651 508 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 CEACAM1P13688 526 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 SPINK2P20155 84 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 AVPR1AP37288 418 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 MATR3P43243 847 aaKnown RBP eCLIP13.87□□□□□ -0.19
USP28-212ENST00000544750 AMPD2Q01433 879 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 SMARCB1Q12824 385 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 FOXC1Q12948 553 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 DMC1Q14565 340 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 RABEP1Q15276 862 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 ARSHQ5FYA8 562 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 DAB2IPQ5VWQ8 1189 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 MON1AQ86VX9 555 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 CD302Q8IX05 232 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 KCTD17Q8N5Z5 321 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 LLPHQ9BRT6 129 aaKnown RBP13.87□□□□□ -0.19
USP28-212ENST00000544750 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 DSEQ9UL01 958 aa13.87□□□□□ -0.19
USP28-212ENST00000544750 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
USP28-212ENST00000544750 NPHP3-ACAD11A0A0J9YXS1 232 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 TMEM8BA6NDV4 472 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 H0YCG3 227 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 BFSP1Q12934 665 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 PDGFRLQ15198 375 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 ZNF77Q15935 545 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 RASSF3Q86WH2 238 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 CD101Q93033 1021 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 SCNM1Q9BWG6 230 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 BACH2Q9BYV9 841 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.86□□□□□ -0.19
USP28-212ENST00000544750 TMLHEQ9NVH6 421 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 LARSQ9P2J5 1176 aaKnown RBP13.86□□□□□ -0.19
USP28-212ENST00000544750 DERAQ9Y315 318 aa13.86□□□□□ -0.19
USP28-212ENST00000544750 LAMA5O15230 3695 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 SRRM3A6NNA2 597 aaPredicted RBP13.85□□□□□ -0.19
USP28-212ENST00000544750 PATE3B3GLJ2 98 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 CYB561D2O14569 222 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 HNRNPDLO14979 420 aaKnown RBP13.85□□□□□ -0.19
USP28-212ENST00000544750 GPR15P49685 360 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 LIG4P49917 911 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 USP4Q13107 963 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 MTF1Q14872 753 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 TMEM132DQ14C87 1099 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 TAF12Q16514 161 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 EML3Q32P44 896 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 WSCD1Q658N2 575 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 DTHD1Q6ZMT9 781 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 STKLD1Q8NE28 680 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 OSCP1Q8WVF1 389 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 ACDQ96AP0 544 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 BICD1Q96G01 975 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 SLC22A12Q96S37 553 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 TMEM9BQ9NQ34 198 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 ABI2Q9NYB9 513 aaPredicted RBP13.85□□□□□ -0.19
USP28-212ENST00000544750 C2CD2Q9Y426 696 aa13.85□□□□□ -0.19
USP28-212ENST00000544750 ADAMTS20P59510 1910 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 ANKRD11Q6UB99 2663 aaPredicted RBP13.84□□□□□ -0.19
USP28-212ENST00000544750 ANTXRLA6NF34 631 aa13.84□□□□□ -0.19
USP28-212ENST00000544750 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms