RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	CASS4	Q9NQ75	786 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	COL20A1	Q9P218	1284 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	PAXBP1	Q9Y5B6	917 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	FSHB	P01225	129 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	SRGN	P10124	158 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	PHKG2	P15735	406 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	ZKSCAN1	P17029	563 aa	Predicted RBP	6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	WNT3	P56703	355 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	RPS16	P62249	146 aa	Known RBP	6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	BLOC1S1	P78537	153 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	KLF10	Q13118	480 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	DCAF12L1	Q5VU92	463 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	LAYN	Q6UX15	382 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	CCDC146	Q8IYE0	955 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	ULK2	Q8IYT8	1036 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	OR56A3	Q8NH54	315 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	LPIN2	Q92539	896 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	PHKB	Q93100	1093 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	OSBPL9	Q96SU4	736 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	PCGF6	Q9BYE7	350 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	CYP4F11	Q9HBI6	524 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	SYBU	Q9NX95	663 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	KCTD5	Q9NXV2	234 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	CORO2B	Q9UQ03	480 aa		6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	6.47	□□□□□ -1.37
LEMD3-205	ENST00000544506	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	MBD3L3	A6NE82	208 aa	Predicted RBP	6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	TRIAP1	O43715	76 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	HKR1	P10072	659 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	CYP2C9	P11712	490 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	KRT4	P19013	534 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	CD6	P30203	668 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	GDF5	P43026	501 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	PXN	P49023	591 aa	Predicted RBP	6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	LCE5A	Q5TCM9	118 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	VPS53	Q5VIR6	699 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	FAM109A	Q8N4B1	249 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	SLC44A3	Q8N4M1	653 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	BEND2	Q8NDZ0	799 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	LINC00476	Q8WZB0	136 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	MESP1	Q9BRJ9	268 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	KRTAP4-7	Q9BYR0	210 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	ING1	Q9UK53	422 aa	Predicted RBP	6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	SNX13	Q9Y5W8	968 aa		6.46	□□□□□ -1.38
LEMD3-205	ENST00000544506	COL4A3	Q01955	1670 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	ANO9	A1A5B4	782 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	RHPN2P1	A8MT19	583 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	PYCARD-AS1	I3L0S3	204 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	RPL17	P18621	184 aa	Known RBP	6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	TGM1	P22735	817 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	KLRC1	P26715	233 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	PIK3CB	P42338	1070 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	AVPR1B	P47901	424 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	HNRNPM	P52272	730 aa	Known RBP eCLIP	6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	MAP9	Q49MG5	647 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	TSHZ1	Q6ZSZ6	1077 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	GAS2L3	Q86XJ1	694 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	ZNF280B	Q86YH2	543 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	AMER2	Q8N7J2	671 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	B3GALNT2	Q8NCR0	500 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	MYCBPAP	Q8TBZ2	947 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	RAPGEF4	Q8WZA2	1011 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	MSLNL	Q96KJ4	702 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	COQ10A	Q96MF6	247 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	AIFM2	Q9BRQ8	373 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	NAA15	Q9BXJ9	866 aa	Known RBP	6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	A1CF	Q9NQ94	594 aa	Known RBP	6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	SHOC2	Q9UQ13	582 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	DMTF1	Q9Y222	760 aa		6.45	□□□□□ -1.38
LEMD3-205	ENST00000544506	TMEM191C	A6NGB0	347 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506		F8W8V4	182 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	PROM1	O43490	865 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	MYL3	P08590	195 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	XRCC6	P12956	609 aa	Known RBP eCLIP	6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	FHL2	Q14192	279 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	HECTD2	Q5U5R9	776 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	VWA1	Q6PCB0	445 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	ZDHHC24	Q6UX98	284 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506		Q6ZNX1	250 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	LDLRAD3	Q86YD5	345 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	SLC16A11	Q8NCK7	471 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	SUPT20H	Q8NEM7	779 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	CAVIN3	Q969G5	261 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	PRRX2	Q99811	253 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	PTDSS2	Q9BVG9	487 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	ACTRT3	Q9BYD9	372 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	TPSD1	Q9BZJ3	242 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	AMBRA1	Q9C0C7	1298 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	PCED1A	Q9H1Q7	454 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	EPN1	Q9Y6I3	576 aa	Predicted RBP	6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	MAST3	O60307	1309 aa		6.44	□□□□□ -1.38
LEMD3-205	ENST00000544506	CYR61	O00622	381 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	KPNA5	O15131	536 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	PPIF	P30405	207 aa	Known RBP	6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	NEK3	P51956	506 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	SEC24C	P53992	1094 aa		6.43	□□□□□ -1.38
LEMD3-205	ENST00000544506	TAP1	Q03518	808 aa		6.43	□□□□□ -1.38

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