RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 KRT31Q15323 416 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 AAK1Q2M2I8 961 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 UVSSAQ2YD98 709 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 FAM171BQ6P995 826 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 GPR149Q86SP6 731 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 ARHGEF19Q8IW93 802 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 SUSD6Q92537 303 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 FAXDC2Q96IV6 333 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 ASB2Q96Q27 587 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 TWNKQ96RR1 684 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 PRKD2Q9BZL6 878 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 CYP3A43Q9HB55 503 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
CD9-210ENST00000543916 MAFFQ9ULX9 164 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 SLC27A5Q9Y2P5 690 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 YIPF1Q9Y548 306 aa16.11■□□□□ 0.17
CD9-210ENST00000543916 CCL16O15467 120 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 HNRNPA1P09651 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
CD9-210ENST00000543916 IL9P15248 144 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 PTPN1P18031 435 aaKnown RBP16.1■□□□□ 0.17
CD9-210ENST00000543916 SMARCB1Q12824 385 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 CUL2Q13617 745 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 MDH1BQ5I0G3 518 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 CES5AQ6NT32 575 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 B3GALNT2Q8NCR0 500 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 SPPL2BQ8TCT7 592 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 C2orf15Q8WU43 125 aaKnown RBP16.1■□□□□ 0.17
CD9-210ENST00000543916 SMG7Q92540 1137 aaKnown RBP16.1■□□□□ 0.17
CD9-210ENST00000543916 KAT5Q92993 513 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 MYLPFQ96A32 169 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 NT5C1BQ96P26 610 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 RHOBTB2Q9BYZ6 727 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 VPS16Q9H269 839 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 CBX8Q9HC52 389 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 CISHQ9NSE2 258 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 LIMA1Q9UHB6 759 aaKnown RBP16.1■□□□□ 0.17
CD9-210ENST00000543916 PCDHB5Q9Y5E4 795 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 C5orf42Q9H799 3197 aa16.1■□□□□ 0.17
CD9-210ENST00000543916 GTPBP10A4D1E9 387 aaKnown RBP16.09■□□□□ 0.17
CD9-210ENST00000543916 SMTNL1A8MU46 457 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
CD9-210ENST00000543916 CILPO75339 1184 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 ATP1A3P13637 1013 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 SLC9A1P19634 815 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 APBA1Q02410 837 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 TWF1Q12792 350 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 SMAD2Q15796 467 aaKnown RBP16.09■□□□□ 0.17
CD9-210ENST00000543916 NFE2Q16621 373 aaPredicted RBP16.09■□□□□ 0.17
CD9-210ENST00000543916 PUS10Q3MIT2 529 aaKnown RBP16.09■□□□□ 0.17
CD9-210ENST00000543916 TRIM65Q6PJ69 517 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 GBP6Q6ZN66 633 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 RTL10Q7L3V2 364 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 ACOT1Q86TX2 421 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 UNC93AQ86WB7 457 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 UBR7Q8N806 425 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 PCED1BQ96HM7 432 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 SEPT5Q99719 369 aaPredicted RBP16.09■□□□□ 0.17
CD9-210ENST00000543916 POMKQ9H5K3 350 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 HSFX1Q9UBD0 423 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 NOTCH4Q99466 2003 aa16.09■□□□□ 0.17
CD9-210ENST00000543916 TCF20Q9UGU0 1960 aaKnown RBP16.08■□□□□ 0.16
CD9-210ENST00000543916 LRG1P02750 347 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 POU2F2P09086 479 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 HAPLN1P10915 354 aaPredicted RBP16.08■□□□□ 0.16
CD9-210ENST00000543916 BMP1P13497 986 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 CYP2F1P24903 491 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 MTHFRP42898 656 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 COPB1P53618 953 aaKnown RBP16.08■□□□□ 0.16
CD9-210ENST00000543916 CYP27A1Q02318 531 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
CD9-210ENST00000543916 MAPRE1Q15691 268 aaKnown RBP16.08■□□□□ 0.16
CD9-210ENST00000543916 EXOC3L4Q17RC7 722 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 MGAT5BQ3V5L5 792 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 CFAP221Q4G0U5 840 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 PHLDB3Q6NSJ2 640 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 CYP26C1Q6V0L0 522 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 RRAGAQ7L523 313 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
CD9-210ENST00000543916 LUZP1Q86V48 1076 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
CD9-210ENST00000543916 CRYBG2Q8N1P7 616 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 TNIP3Q96KP6 325 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 ELOVL4Q9GZR5 314 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 ABCB6Q9NP58 842 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 SIX2Q9NPC8 291 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 HCFC1R1Q9NWW0 138 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 CEP72Q9P209 647 aa16.08■□□□□ 0.16
CD9-210ENST00000543916 BECN2A8MW95 431 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 CLDN5O00501 218 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 XYLBO75191 536 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 ATF6P18850 670 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 TBXAS1P24557 533 aaPredicted RBP16.07■□□□□ 0.16
CD9-210ENST00000543916 PON1P27169 355 aa16.07■□□□□ 0.16
CD9-210ENST00000543916 GPR15P49685 360 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms