RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 HAPLN1P10915 354 aaPredicted RBP11.81□□□□□ -0.52
DDB1-222ENST00000543627 CD58P19256 250 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 BMP6P22004 513 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 WARSP23381 471 aaKnown RBP11.81□□□□□ -0.52
DDB1-222ENST00000543627 BDNFP23560 247 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 GRIK1P39086 918 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 PPP1R2P41236 205 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 PAK1Q13153 545 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 ORC1Q13415 861 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 TEAD2Q15562 447 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 TPD52L1Q16890 204 aaPredicted RBP11.81□□□□□ -0.52
DDB1-222ENST00000543627 ZACNQ401N2 412 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 C1orf220Q5T0J3 134 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 ITIH5Q86UX2 942 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 TTC16Q8NEE8 873 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 TAS1R2Q8TE23 839 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 C2orf15Q8WU43 125 aaKnown RBP11.81□□□□□ -0.52
DDB1-222ENST00000543627 EDAQ92838 391 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 MYLPFQ96A32 169 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
DDB1-222ENST00000543627 DPEP3Q9H4B8 488 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 CLSTN2Q9H4D0 955 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 ARMCX3Q9UH62 379 aaPredicted RBP11.81□□□□□ -0.52
DDB1-222ENST00000543627 FBXL21Q9UKT6 434 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 CDH9Q9ULB4 789 aa11.81□□□□□ -0.52
DDB1-222ENST00000543627 MYO10Q9HD67 2058 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 GABRDO14764 452 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 NARSO43776 548 aaKnown RBP11.8□□□□□ -0.52
DDB1-222ENST00000543627 STX10O60499 249 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 LRRN2O75325 713 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 CFHP08603 1231 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 PTPN1P18031 435 aaKnown RBP11.8□□□□□ -0.52
DDB1-222ENST00000543627 RFX1P22670 979 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 GABRR2P28476 465 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 CCR2P41597 374 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 MXI1P50539 228 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 CLDN10P78369 228 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 SMARCB1Q12824 385 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 IFRD2Q12894 506 aaPredicted RBP11.8□□□□□ -0.52
DDB1-222ENST00000543627 LRMPQ12912 555 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 TDGQ13569 410 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 COBLL1Q53SF7 1204 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 WDR44Q5JSH3 913 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 KRT39Q6A163 491 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 PARM1Q6UWI2 310 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 C4orf50Q6ZRC1 276 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 NPAS3Q8IXF0 933 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 TMEM174Q8WUU8 243 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 PBXIP1Q96AQ6 731 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 DUSP9Q99956 384 aaKnown RBP11.8□□□□□ -0.52
DDB1-222ENST00000543627 KXD1Q9BQD3 176 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 MKNK1Q9BUB5 465 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 RPP25Q9BUL9 199 aaKnown RBP11.8□□□□□ -0.52
DDB1-222ENST00000543627 XYLT2Q9H1B5 865 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 DNAJC25Q9H1X3 360 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 TMEM8AQ9HCN3 771 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 ZNF334Q9HCZ1 680 aaPredicted RBP11.8□□□□□ -0.52
DDB1-222ENST00000543627 CRTAC1Q9NQ79 661 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 IGSF9Q9P2J2 1179 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 NUMBLQ9Y6R0 609 aa11.8□□□□□ -0.52
DDB1-222ENST00000543627 TMEM221A6NGB7 291 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 M0R296 226 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 CLDN5O00501 218 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 SLC16A3O15427 465 aaKnown RBP11.79□□□□□ -0.52
DDB1-222ENST00000543627 TACC1O75410 805 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 ATF6P18850 670 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 ANXA13P27216 316 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 NDST1P52848 882 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 RPL10AP62906 217 aaKnown RBP11.79□□□□□ -0.52
DDB1-222ENST00000543627 CYP4F8P98187 520 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 MAPRE1Q15691 268 aaKnown RBP11.79□□□□□ -0.52
DDB1-222ENST00000543627 ZNF394Q53GI3 561 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 GPR158Q5T848 1215 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 FILIP1Q7Z7B0 1213 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 ACOT1Q86TX2 421 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 SLC44A3Q8N4M1 653 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 TRIML1Q8N9V2 468 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 FGF14Q92915 247 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 PSMG2Q969U7 264 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 ZSWIM3Q96MP5 696 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 LRFN3Q9BTN0 628 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 SDCBP2Q9H190 292 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 MFSD1Q9H3U5 465 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 RAB20Q9NX57 234 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 EPS15L1Q9UBC2 864 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 ASB3Q9Y575 518 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 NME7Q9Y5B8 376 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 BDP1A6H8Y1 2624 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 NCOR1O75376 2440 aa11.79□□□□□ -0.52
DDB1-222ENST00000543627 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
DDB1-222ENST00000543627 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
DDB1-222ENST00000543627 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
DDB1-222ENST00000543627 ABL1P00519 1130 aa11.78□□□□□ -0.52
DDB1-222ENST00000543627 ASS1P00966 412 aaKnown RBP11.78□□□□□ -0.52
DDB1-222ENST00000543627 POU2F2P09086 479 aa11.78□□□□□ -0.52
DDB1-222ENST00000543627 GTF2H1P32780 548 aa11.78□□□□□ -0.52
DDB1-222ENST00000543627 NOP14P78316 857 aaKnown RBP11.78□□□□□ -0.52
DDB1-222ENST00000543627 SIGLEC14Q08ET2 396 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms