RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
GPN3-203ENST00000543199 TSPY1Q01534 308 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 BFSP1Q12934 665 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 GSE1Q14687 1217 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 TXNDC8Q6A555 127 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 PKN3Q6P5Z2 889 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 PRR23CQ6ZRP0 262 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 DCP1BQ8IZD4 617 aaKnown RBP13.78□□□□□ -0.2
GPN3-203ENST00000543199 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
GPN3-203ENST00000543199 NETO1Q8TDF5 533 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
GPN3-203ENST00000543199 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 PI4K2AQ9BTU6 479 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 HPS4Q9NQG7 708 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 PCDHB5Q9Y5E4 795 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 CLIC4Q9Y696 253 aa13.78□□□□□ -0.2
GPN3-203ENST00000543199 OTOL1A6NHN0 477 aaPredicted RBP13.77□□□□□ -0.21
GPN3-203ENST00000543199 GDF9O60383 454 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 LRP3O75074 770 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
GPN3-203ENST00000543199 PPP1R37O75864 691 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 IL18RAPO95256 599 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 ITGB3P05106 788 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 HMGA1P17096 107 aaKnown RBP13.77□□□□□ -0.21
GPN3-203ENST00000543199 NLRP12P59046 1061 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 RUNX3Q13761 415 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 POSTNQ15063 836 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 SYNPOQ8N3V7 929 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 PDCL2Q8N4E4 241 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 TTC16Q8NEE8 873 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 RIN3Q8TB24 985 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 HVCN1Q96D96 273 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 CLIC6Q96NY7 704 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 FAM83CQ9BQN1 747 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 CCDC39Q9UFE4 941 aa13.77□□□□□ -0.21
GPN3-203ENST00000543199 MYMKA6NI61 221 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 GCNT3O95395 438 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 F11P03951 625 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 ACAT1P24752 427 aaKnown RBP13.76□□□□□ -0.21
GPN3-203ENST00000543199 PNPLA4P41247 253 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
GPN3-203ENST00000543199 PTPAQ15257 358 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 CSRP2Q16527 193 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 DDR2Q16832 855 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 TMEM196Q5HYL7 178 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 BRSK2Q8IWQ3 736 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 NOC3LQ8WTT2 800 aaKnown RBP13.76□□□□□ -0.21
GPN3-203ENST00000543199 CHFRQ96EP1 664 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 STRA6Q9BX79 667 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 TDP1Q9NUW8 608 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 DDX43Q9NXZ2 648 aaKnown RBP13.76□□□□□ -0.21
GPN3-203ENST00000543199 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 ZMYM5Q9UJ78 669 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 AGAP1Q9UPQ3 857 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 EXOC7Q9UPT5 735 aa13.76□□□□□ -0.21
GPN3-203ENST00000543199 GOLGA8IPA6NC78 632 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 GOLGA8JA6NMD2 632 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 SLC30A4O14863 429 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 CSH1P0DML2 217 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 CSH2P0DML3 217 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 ARSAP15289 507 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 CASP5P51878 434 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 GRSF1Q12849 480 aaKnown RBP eCLIP13.75□□□□□ -0.21
GPN3-203ENST00000543199 CCDC6Q16204 474 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 NFE2Q16621 373 aaPredicted RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 CCDC142Q17RM4 750 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 L1TD1Q5T7N2 865 aaKnown RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 RRAGBQ5VZM2 374 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 FSTL4Q6MZW2 842 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 CC2D1AQ6P1N0 951 aaPredicted RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 WDR5BQ86VZ2 330 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 CSGALNACT2Q8N6G5 542 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 MRPS31Q92665 395 aaKnown RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 DNAJC19Q96DA6 116 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 ACCSQ96QU6 501 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 RBAKQ9NYW8 714 aaPredicted RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 SEL1LQ9UBV2 794 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
GPN3-203ENST00000543199 HCRTO43612 131 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 HUS1O60921 280 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 TADA3O75528 432 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 EGFP01133 1207 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 KRT19P08727 400 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 IDEP14735 1019 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 CYP2F1P24903 491 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 DDX6P26196 483 aaKnown RBP eCLIP13.75□□□□□ -0.21
GPN3-203ENST00000543199 HOXA6P31267 233 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 TXLNAP40222 546 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 PPM1JQ5JR12 505 aa13.75□□□□□ -0.21
GPN3-203ENST00000543199 NAIF1Q69YI7 327 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms