RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TNIP3Q96KP6 325 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 DPEP3Q9H4B8 488 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 CRTAC1Q9NQ79 661 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 PRUNE2Q8WUY3 3088 aa18.25■□□□□ 0.51
RABGGTA-203ENST00000543002 CILPO75339 1184 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 RFPL2O75678 378 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 HNRNPA1P09651 372 aaKnown RBP eCLIP18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 PTPN1P18031 435 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 CD58P19256 250 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 SLC9A1P19634 815 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 PON1P27169 355 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 YWHAEP62258 255 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 TPM4P67936 248 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 GCNT1Q02742 428 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 TFF2Q03403 129 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 ITIH3Q06033 890 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 DUSP4Q13115 394 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 CLUL1Q15846 466 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 CCDC142Q17RM4 750 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 PPM1LQ5SGD2 360 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 RARS2Q5T160 578 aaKnown RBP18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 PHLDB3Q6NSJ2 640 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 ARHGEF19Q8IW93 802 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 CRYBG2Q8N1P7 616 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 B3GALNT2Q8NCR0 500 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 MYCBPAPQ8TBZ2 947 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 CRISPLD1Q9H336 500 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 CISHQ9NSE2 258 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 HMGXB4Q9UGU5 601 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 PCDHB5Q9Y5E4 795 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 INSL5Q9Y5Q6 135 aa18.24■□□□□ 0.51
RABGGTA-203ENST00000543002 CCDC195A0A1B0GUA6 201 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 GOLGA6L19H0YKK7 550 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 KCNMA1Q12791 1236 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 AAK1Q2M2I8 961 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 TMC5Q6UXY8 1006 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 CYP26C1Q6V0L0 522 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 C4orf50Q6ZRC1 276 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 RRAGAQ7L523 313 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 ACOT1Q86TX2 421 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 UBR7Q8N806 425 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 WHAMMQ8TF30 809 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 FUBP3Q96I24 572 aaKnown RBP eCLIP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 TWNKQ96RR1 684 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 APOL5Q9BWW9 433 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 NT5C1AQ9BXI3 368 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 RHOBTB2Q9BYZ6 727 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 PRKD2Q9BZL6 878 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 ADAM7Q9H2U9 754 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 ABCB6Q9NP58 842 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 ABI2Q9NYB9 513 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 SLC27A5Q9Y2P5 690 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 LGALS16A8MUM7 142 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 POU2F2P09086 479 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 TUFMP49411 452 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 CDR1P51861 262 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 SMAD4Q13485 552 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 PUS10Q3MIT2 529 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 CFAP221Q4G0U5 840 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 MDH1BQ5I0G3 518 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 FKBP15Q5T1M5 1219 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 CES5AQ6NT32 575 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 GPR149Q86SP6 731 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 SPATA2LQ8IUW3 424 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 TTC9BQ8N6N2 239 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 ATXN2LQ8WWM7 1075 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 KAT5Q92993 513 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 MYLPFQ96A32 169 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 ZNF707Q96C28 371 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 PCED1BQ96HM7 432 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 FAM81BQ96LP2 452 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 LPIN3Q9BQK8 851 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 SIX2Q9NPC8 291 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 UBE2TQ9NPD8 197 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 APEX2Q9UBZ4 518 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 YIPF1Q9Y548 306 aa18.23■□□□□ 0.51
RABGGTA-203ENST00000543002 GRXCR2A6NFK2 248 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 MBTPS2O43462 519 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 LRG1P02750 347 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 HAPLN1P10915 354 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 TRIM21P19474 475 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 ACO1P21399 889 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 ORC1Q13415 861 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 ENOSF1Q7L5Y1 443 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 FEZF2Q8TBJ5 459 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 SUSD6Q92537 303 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 JAKMIP2Q96AA8 810 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 KREMEN1Q96MU8 473 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 ELOVL4Q9GZR5 314 aa18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 USP15Q9Y4E8 981 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-203ENST00000543002 CCL16O15467 120 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 XYLBO75191 536 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 MAGEA11P43364 429 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 RAD23BP54727 409 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 MFAP3P55082 362 aa18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 MRPS5P82675 430 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-203ENST00000543002 CYP27A1Q02318 531 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms