RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 TMEM150AQ86TG1 271 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 LEO1Q8WVC0 666 aaPredicted RBP12.77□□□□□ -0.37
PTPN6-219ENST00000542848 FAM83CQ9BQN1 747 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 ACBD6Q9BR61 282 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 IKZF4Q9H2S9 585 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 OLFML3Q9NRN5 406 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 GKN1Q9NS71 199 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 ABI2Q9NYB9 513 aaPredicted RBP12.77□□□□□ -0.37
PTPN6-219ENST00000542848 FBXO2Q9UK22 296 aaPredicted RBP12.77□□□□□ -0.37
PTPN6-219ENST00000542848 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 ACACBO00763 2458 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 VPS37CA5D8V6 355 aaPredicted RBP12.76□□□□□ -0.37
PTPN6-219ENST00000542848 MYMKA6NI61 221 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 FOXD2O60548 495 aaPredicted RBP12.76□□□□□ -0.37
PTPN6-219ENST00000542848 HUS1O60921 280 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 PRPF40AO75400 957 aaKnown RBP12.76□□□□□ -0.37
PTPN6-219ENST00000542848 CSH1P0DML2 217 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 CSH2P0DML3 217 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 GARTP22102 1010 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 TXLNAP40222 546 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 CDR1P51861 262 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 AMPD2Q01433 879 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 DMWDQ09019 674 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 KCNA1Q09470 495 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 ALCAMQ13740 583 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 RUNX3Q13761 415 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 CSRP2Q16527 193 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 BRSK2Q8IWQ3 736 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 TMEM86AQ8N2M4 240 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 MAB21L3Q8N8X9 362 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 SPATA18Q8TC71 538 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 SMG9Q9H0W8 520 aaKnown RBP12.76□□□□□ -0.37
PTPN6-219ENST00000542848 KIF9Q9HAQ2 790 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 ABCB6Q9NP58 842 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 TDP1Q9NUW8 608 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 TMLHEQ9NVH6 421 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 AGAP1Q9UPQ3 857 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 LAMA1P25391 3075 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 THADAQ6YHU6 1953 aa12.76□□□□□ -0.37
PTPN6-219ENST00000542848 MYO18AQ92614 2054 aaKnown RBP12.76□□□□□ -0.37
PTPN6-219ENST00000542848 CCDC163A0A0D9SF12 145 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 TRDMT1O14717 391 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 ATG13O75143 517 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 GCNT3O95395 438 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 ITGB3P05106 788 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 RPL10AP62906 217 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 TFAMQ00059 246 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 MYL7Q01449 175 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 BFSP1Q12934 665 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 ZNF268Q14587 947 aaPredicted RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 TMEM196Q5HYL7 178 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 HEATR6Q6AI08 1181 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 MON1AQ86VX9 555 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 SYCP3Q8IZU3 236 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 LRRC52Q8N7C0 313 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 ZSWIM2Q8NEG5 633 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 NETO1Q8TDF5 533 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 MRPS31Q92665 395 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 USP13Q92995 863 aaPredicted RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 MYRFLQ96LU7 910 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 CLIC6Q96NY7 704 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 IPO9Q96P70 1041 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 PI4K2AQ9BTU6 479 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 HPS4Q9NQG7 708 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 SEMA4GQ9NTN9 838 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 C2orf42Q9NWW7 574 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 GDAP2Q9NXN4 497 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 DDX43Q9NXZ2 648 aaKnown RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 TBC1D7Q9P0N9 293 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 UXTQ9UBK9 157 aaPredicted RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 ITGA11Q9UKX5 1188 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 L1RE1Q9UN81 338 aa12.75□□□□□ -0.37
PTPN6-219ENST00000542848 MORC2Q9Y6X9 1032 aaPredicted RBP12.75□□□□□ -0.37
PTPN6-219ENST00000542848 EPG5Q9HCE0 2579 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 FRMD3A2A2Y4 597 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 DCDC2BA2VCK2 349 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 SLC30A4O14863 429 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 EXTL3O43909 919 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 LHX1P48742 406 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 CASP5P51878 434 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 WNT7BP56706 349 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 RBP5P82980 135 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 SRSF5Q13243 272 aaKnown RBP12.74□□□□□ -0.37
PTPN6-219ENST00000542848 INTS6LQ5JSJ4 861 aaKnown RBP12.74□□□□□ -0.37
PTPN6-219ENST00000542848 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
PTPN6-219ENST00000542848 PRR23CQ6ZRP0 262 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 CEP68Q76N32 757 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 TOP6BLQ8N6T0 577 aa12.74□□□□□ -0.37
PTPN6-219ENST00000542848 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms