RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 E2F5Q15329 346 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 LONRF1Q17RB8 773 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 TMEM196Q5HYL7 178 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 STXBP5Q5T5C0 1151 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 CD300LGQ6UXG3 332 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 HAUS6Q7Z4H7 955 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 CHD1LQ86WJ1 897 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 ELMOD1Q8N336 334 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 ERP27Q96DN0 273 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 CHFRQ96EP1 664 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 GPR88Q9GZN0 384 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 XPNPEP1Q9NQW7 623 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 TMEM63CQ9P1W3 806 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 EVLQ9UI08 416 aaPredicted RBP8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 MAFFQ9ULX9 164 aa8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 RBM8AQ9Y5S9 174 aaKnown RBP8.4□□□□□ -1.06
NPIPB4-215ENST00000542133 ABCA7Q8IZY2 2146 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 THADAQ6YHU6 1953 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 MYO16Q9Y6X6 1858 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 A0A1W2PRU2 124 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 A6NJY4 79 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 EML1O00423 815 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 SCAMP3O14828 347 aaKnown RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TBX3O15119 743 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 RECQL4O94761 1208 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 B3GAT3O94766 335 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TDP2O95551 362 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 APBB3O95704 486 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TPM3P06753 285 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 GSPT1P15170 499 aaKnown RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 GNALP38405 381 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 BRCC3P46736 316 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 QARSP47897 775 aaKnown RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TRAPPC10P48553 1259 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 CLCNKBP51801 687 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ARPP19P56211 112 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TWF1Q12792 350 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TFDP1Q14186 410 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 MXD4Q14582 209 aaPredicted RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TMEM95Q3KNT9 176 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 Q4G0T1 1027 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TRIM61Q5EBN2 209 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 SYNE3Q6ZMZ3 975 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 C11orf74Q86VG3 221 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TMC8Q8IU68 726 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 RELL1Q8IUW5 271 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ARID3BQ8IVW6 561 aaPredicted RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 MYO1HQ8N1T3 1032 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 C3orf58Q8NDZ4 430 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 MNS1Q8NEH6 495 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 MDM1Q8TC05 714 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ASAP3Q8TDY4 903 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 CCDC12Q8WUD4 166 aaPredicted RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 RUFY2Q8WXA3 655 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TSC1Q92574 1164 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ERCC4Q92889 916 aaPredicted RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 TATDN2Q93075 761 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 BHMTQ93088 406 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 SYAP1Q96A49 352 aaPredicted RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ZNF512Q96ME7 567 aaPredicted RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 MTRQ99707 1265 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 LRRC3Q9BY71 257 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 NFKBIZQ9BYH8 718 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 EBF1Q9UH73 591 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 IKBKGQ9Y6K9 419 aa8.39□□□□□ -1.07
NPIPB4-215ENST00000542133 ATG2BQ96BY7 2078 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 GOLGA8AA7E2F4 631 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 GOLGA8BA8MQT2 603 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 SGSM2O43147 1006 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 ZBTB43O43298 467 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 DKC1O60832 514 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 PRAMEF12O95522 483 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 EGFP01133 1207 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 NAT2P11245 290 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 ENGP17813 658 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 BCKDHBP21953 392 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 RRM1P23921 792 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 CHMLP26374 656 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 GNA11P29992 359 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 CDC27P30260 824 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 YWHABP31946 246 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 RDXP35241 583 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 USP11P51784 963 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 ZNF131P52739 623 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 CCT2P78371 535 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 NUCB1Q02818 461 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 GRSF1Q12849 480 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 BRD3Q15059 726 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 ITPRIPL2Q3MIP1 535 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 ZNF394Q53GI3 561 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 TPGS2Q68CL5 300 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 SYT13Q7L8C5 426 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 LURAP1LQ8IV03 231 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 PIGKQ92643 395 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 CRELD1Q96HD1 420 aa8.38□□□□□ -1.07
NPIPB4-215ENST00000542133 UBL7Q96S82 380 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms