RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 DENND1AQ8TEH3 1009 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 SCG3Q8WXD2 468 aaKnown RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 PCYT2Q99447 389 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 WNT8AQ9H1J5 351 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 ANAPC5Q9UJX4 755 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 PCDHA10Q9Y5I2 948 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 MAPK13O15264 365 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 EDF1O60869 148 aaKnown RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 CDH16O75309 829 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 BANF1O75531 89 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 UBTFL6P0CB48 400 aaPredicted RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 ATF2P15336 505 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 CTGFP29279 349 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 NEK3P51956 506 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 GTF2A2P52657 109 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 FMO1Q01740 532 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 BFSP1Q12934 665 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 TBC1D25Q3MII6 688 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 MTHFD1LQ6UB35 978 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 NLRP9Q7RTR0 991 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 TRABD2AQ86V40 505 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 RASAL3Q86YV0 1011 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 INPP5DQ92835 1189 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 NACC1Q96RE7 527 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 TRIM4Q9C037 500 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 KIAA1586Q9HCI6 787 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 ALG13Q9NP73 1137 aaKnown RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 ARL8BQ9NVJ2 186 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 FLRT1Q9NZU1 646 aa9.63□□□□□ -0.87
THBS3-211ENST00000541990 NOCTQ9UK39 431 aaKnown RBP9.63□□□□□ -0.87
THBS3-211ENST00000541990 WDR64B1ANS9 1081 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 SPATA31C2B4DYI2 1134 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 FSCN2O14926 492 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 EXOC3O60645 756 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 TBX10O75333 385 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 ZNF286BP0CG31 522 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 TXNP10599 105 aaKnown RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 TCF7P36402 384 aaPredicted RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 MTM1Q13496 603 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 LAMB3Q13751 1172 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 MAPK6Q16659 721 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 TSNAXIP1Q2TAA8 658 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 PPP1R21Q6ZMI0 780 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 ARMCX2Q7L311 632 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 GPR142Q7Z601 462 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 DHX38Q92620 1227 aaKnown RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 KREMEN1Q96MU8 473 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 FBXO6Q9NRD1 293 aaPredicted RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 GSTTP1A0A1W2PQM5 241 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 K7ENM7 598 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CAPN9O14815 690 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CYP1A1P04798 512 aaPredicted RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 ZSCAN5DPP0CG00 497 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 ITIH2P19823 946 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 PTK6Q13882 451 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.87
THBS3-211ENST00000541990 WASHC2DQ5SRD0 308 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 C1orf220Q5T0J3 134 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 FAM178BQ8IXR5 827 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 ANKRD27Q96NW4 1050 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 TRABDQ9H4I3 376 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 ZFP69BQ9UJL9 534 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 EXOC1LA0A1B0GW35 172 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 TTLL13PA6NNM8 815 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 E7ENQ6 273 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 FARP2O94887 1054 aaPredicted RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 SPATA31D3P0C874 917 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 ZCCHC18P0CG32 403 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 BCRP11274 1271 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 HARSP12081 509 aaKnown RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 ETS1P14921 441 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CNGA1P29973 690 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 GJC1P36383 396 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 SERPINB4P48594 390 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CACNA2D1P54289 1103 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CDR2Q01850 454 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CCDC6Q16204 474 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 IZUMO3Q5VZ72 239 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 SCARA3Q6AZY7 606 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 SPATA31D4Q6ZUB0 917 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CLNKQ7Z7G1 428 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 B4GALNT2Q8NHY0 566 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 GRAMD1AQ96CP6 724 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 SPATA33Q96N06 139 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 KLF6Q99612 283 aaPredicted RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 CBWD1Q9BRT8 395 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 MAK16Q9BXY0 300 aaKnown RBP9.62□□□□□ -0.87
THBS3-211ENST00000541990 TUFT1Q9NNX1 390 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 TBC1D22BQ9NU19 505 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 KLHL11Q9NVR0 708 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 DMAC2Q9NW81 257 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 GINS2Q9Y248 185 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 FRMD4BQ9Y2L6 1034 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 NEU2Q9Y3R4 380 aa9.62□□□□□ -0.87
THBS3-211ENST00000541990 CFAP69A5D8W1 941 aa9.61□□□□□ -0.87
THBS3-211ENST00000541990 TCEA3O75764 348 aa9.61□□□□□ -0.87
THBS3-211ENST00000541990 ETS2P15036 469 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms