RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 NBPF20Q3BBV1 942 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 ODF2Q5BJF6 829 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 UBXN11Q5T124 520 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 LCLAT1Q6UWP7 414 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 DDX42Q86XP3 938 aaKnown RBP eCLIP21.3■■□□□ 1
OTUB1-210ENST00000541478 ZDHHC14Q8IZN3 488 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 C18orf25Q96B23 403 aaPredicted RBP21.3■■□□□ 1
OTUB1-210ENST00000541478 CPXM1Q96SM3 734 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 DPH5Q9H2P9 285 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 IPPQ9Y573 584 aa21.3■■□□□ 1
OTUB1-210ENST00000541478 SMIM28A0A1B0GU29 152 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 TCRBV7S2A1N4TA0A589 114 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 OPA1O60313 960 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 CYP3A5P20815 502 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 HSPA9P38646 679 aaKnown RBP21.29■■□□□ 1
OTUB1-210ENST00000541478 GPD2P43304 727 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 GABRB2P47870 512 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 FBXO47Q5MNV8 452 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 FAM228AQ86W67 206 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 UNC93AQ86WB7 457 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 REM2Q8IYK8 340 aaPredicted RBP21.29■■□□□ 1
OTUB1-210ENST00000541478 TSEN2Q8NCE0 465 aaKnown RBP21.29■■□□□ 1
OTUB1-210ENST00000541478 CYTH4Q9UIA0 394 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 CDY2AQ9Y6F7 541 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 TRIP11Q15643 1979 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 CASP8AP2Q9UKL3 1982 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 GOLGA8SH3BPF8 625 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 ECEL1O95672 775 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 SYF2O95926 243 aaKnown RBP21.29■■□□□ 1
OTUB1-210ENST00000541478 PTGIRP43119 386 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 ZNF252P-AS1Q0IIN9 211 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 ZFYVE27Q5T4F4 411 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 CFAP58Q5T655 872 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 DAB2IPQ5VWQ8 1189 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 TTC27Q6P3X3 843 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 DPH6Q7L8W6 267 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 XYLT1Q86Y38 959 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 HACE1Q8IYU2 909 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 RCOR2Q8IZ40 523 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 GRK7Q8WTQ7 553 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 SLCO2A1Q92959 643 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 CXCL16Q9H2A7 254 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 XPNPEP3Q9NQH7 507 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 DDX56Q9NY93 547 aaKnown RBP21.29■■□□□ 1
OTUB1-210ENST00000541478 VPS18Q9P253 973 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 FEZ2Q9UHY8 353 aaPredicted RBP21.29■■□□□ 1
OTUB1-210ENST00000541478 TSPAN16Q9UKR8 245 aa21.29■■□□□ 1
OTUB1-210ENST00000541478 AGPSO00116 658 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 GJC1P36383 396 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 MTMR3Q13615 1198 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 TERF2Q15554 542 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 FAM47CQ5HY64 1035 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 FMO2Q99518 471 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 OSBPL8Q9BZF1 889 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 TRIM31Q9BZY9 425 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 CREBZFQ9NS37 354 aa21.28■■□□□ 1
OTUB1-210ENST00000541478 PDCD11Q14690 1871 aaKnown RBP21.28■■□□□ 1
OTUB1-210ENST00000541478 F8VP50 259 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 PIRO00625 290 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 PPEF2O14830 753 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 RNF40O75150 1001 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 ADAMTS4O75173 837 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 RPS6KA5O75582 802 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 ERBB2P04626 1255 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 RALAP11233 206 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 PSMA2P25787 234 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 COPS2P61201 443 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 OGDHQ02218 1023 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 CACNB2Q08289 660 aaPredicted RBP21.27■■□□□ 1
OTUB1-210ENST00000541478 GDF6Q6KF10 455 aaPredicted RBP21.27■■□□□ 1
OTUB1-210ENST00000541478 SYDE1Q6ZW31 735 aaPredicted RBP21.27■■□□□ 1
OTUB1-210ENST00000541478 POLNQ7Z5Q5 900 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 MRPL45Q9BRJ2 306 aaKnown RBP21.27■■□□□ 1
OTUB1-210ENST00000541478 FAM129AQ9BZQ8 928 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 KLK14Q9P0G3 267 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 FAN1Q9Y2M0 1017 aa21.27■■□□□ 1
OTUB1-210ENST00000541478 RFC1P35251 1148 aaPredicted RBP21.27■□□□□ 0.99
OTUB1-210ENST00000541478 TAF6P49848 677 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 SNX16P57768 344 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 SP3Q02447 781 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 KLF1Q13351 362 aaPredicted RBP21.27■□□□□ 0.99
OTUB1-210ENST00000541478 ACAP1Q15027 740 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 HADHQ16836 314 aaKnown RBP21.27■□□□□ 0.99
OTUB1-210ENST00000541478 SV2CQ496J9 727 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 RPAINQ86UA6 219 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 SERINC5Q86VE9 423 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 SESTD1Q86VW0 696 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 SMG8Q8ND04 991 aaKnown RBP21.27■□□□□ 0.99
OTUB1-210ENST00000541478 MCRS1Q96EZ8 462 aa21.27■□□□□ 0.99
OTUB1-210ENST00000541478 METTL5Q9NRN9 209 aaKnown RBP21.27■□□□□ 0.99
OTUB1-210ENST00000541478 KPNA7A9QM74 516 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 KRT1P04264 644 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 SETSIPP0DME0 302 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 SCN1AP35498 2009 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 NFX1Q12986 1120 aaKnown RBP21.26■□□□□ 0.99
OTUB1-210ENST00000541478 PPP1R7Q15435 360 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 OR6B3Q8NGW1 331 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 NEUROG2Q9H2A3 272 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 CHST12Q9NRB3 414 aa21.26■□□□□ 0.99
OTUB1-210ENST00000541478 GDAP2Q9NXN4 497 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms