RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 COILP38432 576 aaPredicted RBP10.99□□□□□ -0.65
CHFR-219ENST00000541341 PTGIRP43119 386 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 FMO5P49326 533 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 MRPS25P82663 173 aaKnown RBP10.99□□□□□ -0.65
CHFR-219ENST00000541341 GIT2Q14161 759 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 HIC1Q14526 733 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 MFSD10Q14728 455 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 TAF11Q15544 211 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 STXBP2Q15833 593 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 DCAF17Q5H9S7 520 aaPredicted RBP10.99□□□□□ -0.65
CHFR-219ENST00000541341 NUGGCQ68CJ6 796 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 MIS18BP1Q6P0N0 1132 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.99□□□□□ -0.65
CHFR-219ENST00000541341 VSIG1Q86XK7 387 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 NELFCDQ8IXH7 590 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 C7orf31Q8N865 590 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 FBXO25Q8TCJ0 367 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 LENG9Q96B70 501 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 GPRASP2Q96D09 838 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 NAF1Q96HR8 494 aaKnown RBP10.99□□□□□ -0.65
CHFR-219ENST00000541341 TRAPPC9Q96Q05 1148 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 AGPAT1Q99943 283 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 PITPNM3Q9BZ71 974 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 FAM192AQ9GZU8 254 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 NEUROG2Q9H2A3 272 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 ZFATQ9P243 1243 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 PRKAG3Q9UGI9 489 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 FETUBQ9UGM5 382 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 DNAJC12Q9UKB3 198 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 PCDHA3Q9Y5H8 950 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 ALG6Q9Y672 507 aa10.99□□□□□ -0.65
CHFR-219ENST00000541341 FAM86B1E9PN63 330 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 MEIS1O00470 390 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 MAFGO15525 162 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 SLC37A4O43826 429 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ATP2C2O75185 946 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 UBOX5O94941 541 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 CSPG5O95196 566 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 TDP2O95551 362 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 RPSAP08865 295 aaKnown RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 FAM86B2P0C5J1 330 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 SELPP16109 830 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ATP6V1C1P21283 382 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 PTPN11Q06124 597 aaPredicted RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 KLC1Q07866 573 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 PTP4A2Q12974 167 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 SPARCL1Q14515 664 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 DRAP1Q14919 205 aaPredicted RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 AAK1Q2M2I8 961 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 CEP55Q53EZ4 464 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 FAM133BQ5BKY9 247 aaKnown RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 ZC3H12AQ5D1E8 599 aaKnown RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 ANKRD20A2Q5SQ80 823 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ZNF618Q5T7W0 954 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ANKRD20A3Q5VUR7 823 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 DPY19L2P1Q6NXN4 242 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 SLC30A9Q6PML9 568 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ENOSF1Q7L5Y1 443 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 SDCCAG8Q86SQ7 713 aaPredicted RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 TDRPQ86YL5 185 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 SLC13A5Q86YT5 568 aaPredicted RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHFR-219ENST00000541341 ENDOVQ8N8Q3 282 aaKnown RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 PHOSPHO2Q8TCD6 241 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 PIGOQ8TEQ8 1089 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 AGAP11Q8TF27 550 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 HAS1Q92839 578 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 HLA-CQ95604 372 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ALKBH8Q96BT7 664 aaKnown RBP10.98□□□□□ -0.65
CHFR-219ENST00000541341 FAM122AQ96E09 287 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 LRRC37BQ96QE4 947 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 MXRA8Q9BRK3 442 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 CCDC113Q9H0I3 377 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ZHX3Q9H4I2 956 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 BCAS3Q9H6U6 928 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 RNPEPL1Q9HAU8 725 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 GRHL1Q9NZI5 618 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 GTF2IRD1Q9UHL9 959 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 SNX24Q9Y343 169 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
CHFR-219ENST00000541341 BRWD1Q9NSI6 2320 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 TMEM120BA0PK00 339 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 KLHL33A6NCF5 533 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 A6NHS1 94 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 TCP11X1B4DZS4 312 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 EXOC3O60645 756 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 DIAPH2O60879 1101 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 BAIAP3O94812 1187 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 UPP2O95045 317 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 GCNT3O95395 438 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 TROVE2P10155 538 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHFR-219ENST00000541341 ITGA4P13612 1032 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 ITGB5P18084 799 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 PCK1P35558 622 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 CLCN2P51788 898 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 POLGP54098 1239 aaPredicted RBP10.97□□□□□ -0.65
CHFR-219ENST00000541341 BPIFB4P59827 614 aa10.97□□□□□ -0.65
CHFR-219ENST00000541341 MYL7Q01449 175 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms