RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 C4orf19Q8IY42 314 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 JOSD2Q8TAC2 188 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZNF606Q8WXB4 792 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 DNAJC9Q8WXX5 260 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CPT1BQ92523 772 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 FBXL18Q96ME1 805 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CYLDQ9NQC7 956 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 BATF3Q9NR55 127 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PSMC3IPQ9P2W1 217 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CORO1CQ9ULV4 474 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 EXOC7Q9UPT5 735 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 WDR64B1ANS9 1081 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 SMAPO00193 183 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CYB561D2O14569 222 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CAPN9O14815 690 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PRPF4O43172 522 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 TBX10O75333 385 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ENTPD3O75355 529 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 C4BPAP04003 597 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 MUTP22033 750 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ALDH3A1P30838 453 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 SKIV2L2P42285 1042 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 OSTNP61366 133 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 IRX4P78413 519 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 MXRA7P84157 204 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 RCN2Q14257 317 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 OASLQ15646 514 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PARP6Q2NL67 630 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PLEKHA7Q6IQ23 1121 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 C4orf50Q6ZRC1 276 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 C15orf39Q6ZRI6 1047 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZC3H18Q86VM9 953 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 TFAP2BQ92481 460 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 SENP7Q9BQF6 1050 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PDCD2LQ9BRP1 358 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 TMEM120AQ9BXJ8 343 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 RBAKQ9NYW8 714 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 FBXO40Q9UH90 709 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 hCG_1818297A0A087WSY0 165 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 MAGEB2O15479 319 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 UGT1A9O60656 530 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 CST8O60676 142 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 DCTN3O75935 186 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 USP1O94782 785 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PTGER2P43116 358 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 RAP1GAPP47736 663 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 NEK3P51956 506 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 VCPP55072 806 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 FSTL1Q12841 308 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 BAATQ14032 418 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 ARHGEF16Q5VV41 709 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 SNX30Q5VWJ9 437 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 DPH6Q7L8W6 267 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PRPF39Q86UA1 669 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 MAIP1Q8WWC4 291 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 GRAMD1AQ96CP6 724 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 UGT1A7Q9HAW7 530 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 UGT1A10Q9HAW8 530 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 UGT1A8Q9HAW9 530 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 AGO2Q9UKV8 859 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 AGTPBP1Q9UPW5 1226 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 LRRC42Q9Y546 428 aa10.89□□□□□ -0.67
CDC42SE1-207ENST00000540998 PPP1R12AO14974 1030 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 PLSCR1O15162 318 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 UBTFL6P0CB48 400 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 GNAT1P11488 350 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 MARK3P27448 753 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 RFC1P35251 1148 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 PRKCEQ02156 737 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 FAAP100Q0VG06 881 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 BMPR2Q13873 1038 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 SH3PXD2AQ5TCZ1 1133 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 CENPUQ71F23 418 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 ARFGAP1Q8N6T3 406 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 SCG3Q8WXD2 468 aaKnown RBP10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 NMUR2Q9GZQ4 415 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 KCNK13Q9HB14 408 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 TMOD2Q9NZR1 351 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 TMEM191CA6NGB0 347 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 ALOX15BO15296 676 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 GYG2O15488 501 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 HAUS5O94927 633 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 TMEM191BP0C7N4 346 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 PYGBP11216 843 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 ATP6V1C1P21283 382 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 PTPN4P29074 926 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 RPL22P35268 128 aaKnown RBP10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 GMPRP36959 345 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 CDKN2BP42772 138 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 FOXB2Q5VYV0 432 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 GPAT2Q6NUI2 795 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 DNAJC24Q6P3W2 148 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 KCTD17Q8N5Z5 321 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 VTI1AQ96AJ9 217 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 CYTH2Q99418 400 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 MTMR12Q9C0I1 747 aa10.88□□□□□ -0.67
CDC42SE1-207ENST00000540998 ST6GALNAC4Q9H4F1 302 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms