RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SH3GL1Q99961 368 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF341Q9BYN7 854 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 NMRK2Q9NPI5 230 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 AAASQ9NRG9 546 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 DKK3Q9UBP4 350 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 LGALS13Q9UHV8 139 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 DCTN4Q9UJW0 460 aa9.95□□□□□ -0.82
CTNNA1-243ENST00000540387 FRMPD2Q68DX3 1309 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ADCY6O43306 1168 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 USP2O75604 605 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 FGFR1OPO95684 399 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ASNSP08243 561 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 UBA7P41226 1012 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 EIF2B2P49770 351 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ACTR3P61158 418 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 SPARCL1Q14515 664 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 CYTH1Q15438 398 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 SLC35G1Q2M3R5 365 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 TRMT5Q32P41 509 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ANKDD1AQ495B1 522 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF394Q53GI3 561 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 LPCAT4Q643R3 524 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 TTC27Q6P3X3 843 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ANO5Q75V66 913 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 RSPH3Q86UC2 560 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 PPP4R1Q8TF05 950 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ARMC7Q9H6L4 198 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 HEY2Q9UBP5 337 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 LZTS1Q9Y250 596 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 CARD8Q9Y2G2 431 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 DIS3Q9Y2L1 958 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ACTL7BQ9Y614 415 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 MYH11P35749 1972 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 KLRF2D3W0D1 207 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 F5H6K3 240 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 H3BSA7 217 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ATMINO43313 823 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 MAGEC1O60732 1142 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ATP6V1B1P15313 513 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ENDOUP21128 410 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 CHRNA3P32297 505 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 TRAPPC10P48553 1259 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 RAB15P59190 212 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 NOP14P78316 857 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 NCOA4Q13772 614 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ACAP1Q15027 740 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 CNNM4Q6P4Q7 775 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 LRRC55Q6ZSA7 311 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF410Q86VK4 478 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 RFWD2Q8NHY2 731 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF398Q8TD17 642 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 DENND1AQ8TEH3 1009 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 FAM172AQ8WUF8 416 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 MRPL1Q9BYD6 325 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 UVRAGQ9P2Y5 699 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 RABL2AQ9UBK7 228 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 PCYOX1Q9UHG3 505 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 ZNF112Q9UJU3 913 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 AK5Q9Y6K8 562 aa9.94□□□□□ -0.82
CTNNA1-243ENST00000540387 A0A0A6YYK5 440 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CYTH3O43739 400 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 DNAJC6O75061 913 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 TCEA3O75764 348 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CIB2O75838 187 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 FUCA1P04066 466 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CDH2P19022 906 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 COBLL1Q53SF7 1204 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 FAM209AQ5JX71 171 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 MAP3K21Q5TCX8 1036 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 C6orf163Q5TEZ5 329 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 FYB2Q5VWT5 728 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 BORAQ6PGQ7 559 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 ELMSAN1Q6PJG2 1045 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 DHRS4L2Q6PKH6 230 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 KCTD1Q719H9 257 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 ADGRG6Q86SQ4 1221 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 DHDDSQ86SQ9 333 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 NLRX1Q86UT6 975 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 ERI1Q8IV48 349 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 PRELID2Q8N945 189 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 DDX12PQ92771 950 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CDCA5Q96FF9 252 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 SPZ1Q9BXG8 430 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 MRPS26Q9BYN8 205 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 GPAMQ9HCL2 828 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 SCHIP1Q9P0W5 487 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 PRELID1Q9Y255 219 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 SSC5DA1L4H1 1573 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 BAZ2BQ9UIF8 2168 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 CDH16O75309 829 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 TTC4O95801 387 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 H2AFZP0C0S5 128 aa9.93□□□□□ -0.82
CTNNA1-243ENST00000540387 OCM2P0CE71 109 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms