RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 NRBF2Q96F24 287 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 DGCR6LQ9BY27 220 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 TIMMDC1Q9NPL8 285 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 GCLMP48507 274 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 NME5P56597 212 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 COPZ1P61923 177 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 CLIP4Q8N3C7 705 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 MAELQ96JY0 434 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 GNGT2O14610 69 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 CCDC85BQ15834 202 aaPredicted RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 TRIM60Q495X7 471 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 SLC45A4Q5BKX6 768 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 MROH9Q5TGP6 573 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 TMPRSS6Q8IU80 811 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 RIN3Q8TB24 985 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 FAF2Q96CS3 445 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 INPP4AQ96PE3 977 aaPredicted RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 RIOK1Q9BRS2 568 aaKnown RBP11.58□□□□□ -0.56
PBX1-212ENST00000540236 S100A14Q9HCY8 104 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 ABCB10Q9NRK6 738 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 ZNF510Q9Y2H8 683 aa11.58□□□□□ -0.56
PBX1-212ENST00000540236 A8MV72 311 aaPredicted RBP11.57□□□□□ -0.56
PBX1-212ENST00000540236 TDP2O95551 362 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 ITIH2P19823 946 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 GYG1P46976 350 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 TRMT5Q32P41 509 aaKnown RBP11.57□□□□□ -0.56
PBX1-212ENST00000540236 USP17L2Q6R6M4 530 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 STXBP4Q6ZWJ1 553 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 CLNKQ7Z7G1 428 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 RBM15BQ8NDT2 890 aaKnown RBP11.57□□□□□ -0.56
PBX1-212ENST00000540236 MCUQ8NE86 351 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 ANKRD36BP1Q96IX9 119 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 PIF1Q9H611 641 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 ST14Q9Y5Y6 855 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
PBX1-212ENST00000540236 KIF1BO60333 1816 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 WBP4O75554 376 aaKnown RBP11.57□□□□□ -0.56
PBX1-212ENST00000540236 SDE2Q6IQ49 451 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 TREML1Q86YW5 311 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 PTTG2Q9NZH5 202 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 GMEB1Q9Y692 573 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 SMIM31A0A1B0GVY4 71 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 PFDN6O15212 129 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 CRCPO75575 148 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 TTC4O95801 387 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 BCL10O95999 233 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 SLC16A2P36021 539 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 TFDP1Q14186 410 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 XKR5Q6UX68 686 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 POLNQ7Z5Q5 900 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 TTC30AQ86WT1 665 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 E2F7Q96AV8 911 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 RMND5BQ96G75 393 aaPredicted RBP11.57□□□□□ -0.56
PBX1-212ENST00000540236 K7ENM7 598 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 TSPAN4O14817 238 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 TEX28O15482 410 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 STX3Q13277 289 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 NUP93Q8N1F7 819 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 CENPSQ8N2Z9 138 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 NSMCE3Q96MG7 304 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 PANX3Q96QZ0 392 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 AGPAT1Q99943 283 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 CHST7Q9NS84 486 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 IPPQ9Y573 584 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 OVOS2A0A0G2JMS6 1433 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 ADAMTS12P58397 1594 aa11.57□□□□□ -0.56
PBX1-212ENST00000540236 PAEPP09466 180 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 PSMC2P35998 433 aaKnown RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 MYLK3Q32MK0 819 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 SYTL1Q8IYJ3 562 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 VPS50Q96JG6 964 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 ACP6Q9NPH0 428 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 DNAJC16Q9Y2G8 782 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 SPEF1Q9Y4P9 236 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 KLRF2D3W0D1 207 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 C6orf222P0C671 652 aaPredicted RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 RALAP11233 206 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 MXI1P50539 228 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 EIF3EP60228 445 aaKnown RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 MADCAM1Q13477 382 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 AAGABQ6PD74 315 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 VSTM1Q6UX27 236 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 UTP4Q969X6 686 aaKnown RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 VWDEQ8N2E2 1590 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 KIAA0391O15091 583 aaKnown RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 PENKP01210 267 aaPredicted RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 NR3C1P04150 777 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 TFE3P19532 575 aaPredicted RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 CDH24Q86UP0 819 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 MAPKAPK5Q8IW41 473 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 PSMA8Q8TAA3 256 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 PURBQ96QR8 312 aaKnown RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
PBX1-212ENST00000540236 TSPAN18Q96SJ8 248 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 HERC2P3Q9BVR0 1158 aa11.56□□□□□ -0.56
PBX1-212ENST00000540236 SIK3Q9Y2K2 1263 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms