RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TYRO3Q06418 890 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 SOX4Q06945 474 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-219ENST00000539952 RUNX3Q13761 415 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CALCRLQ16602 461 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TMEM196Q5HYL7 178 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 WDR44Q5JSH3 913 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 NT5DC1Q5TFE4 455 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 EEF1DP3Q658K8 133 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 SYT13Q7L8C5 426 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 ITIH5Q86UX2 942 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CCDC83Q8IWF9 413 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CCDC112Q8NEF3 446 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 BEST2Q8NFU1 509 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TTC8Q8TAM2 541 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 PSMG2Q969U7 264 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 RSPRY1Q96DX4 576 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 MRFAP1L1Q96HT8 127 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 SPATA32Q96LK8 384 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 POLR3CQ9BUI4 534 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TRIM5Q9C035 493 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 NAT10Q9H0A0 1025 aaKnown RBP6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CCDC113Q9H0I3 377 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CLSTN2Q9H4D0 955 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TASP1Q9H6P5 420 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 GOLGA2P5Q9HBQ8 144 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 GDPD2Q9HCC8 539 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TUFT1Q9NNX1 390 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TMEM9BQ9NQ34 198 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 GPRC5CQ9NQ84 441 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 GKN1Q9NS71 199 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 PCNX2A6NKB5 2137 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 A0A087WWV3 80 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 VPS37CA5D8V6 355 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-219ENST00000539952 FAM221BA6H8Z2 402 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 OR6C75A6NL08 312 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 GOLGA8CPA6NN73 597 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 M0QZQ0 153 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 CDX4O14627 284 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-219ENST00000539952 SPATA31C1P0DKV0 1188 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 MCF2P10911 925 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 PAX3P23760 479 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 CDC25CP30307 473 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 DPP6P42658 865 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 GALK1P51570 392 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF75DP51815 510 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 GSDMDP57764 484 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 TPM4P67936 248 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 YWHAHQ04917 246 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-219ENST00000539952 LMAN2Q12907 356 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 DUSP4Q13115 394 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 MYBPC2Q14324 1141 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 GPR158Q5T848 1215 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 CENPPQ6IPU0 288 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 ARMCX5Q6P1M9 558 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 CC2D1AQ6P1N0 951 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-219ENST00000539952 GAREM2Q75VX8 874 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 USP37Q86T82 979 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 CATSPER3Q86XQ3 398 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 TMC8Q8IU68 726 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 ERMNQ8TAM6 284 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 WASF1Q92558 559 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 KIFAP3Q92845 792 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 ZFYVE19Q96K21 471 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF396Q96N95 335 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-219ENST00000539952 AIFM3Q96NN9 605 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 LRRC3BQ96PB8 259 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 MTMR9Q96QG7 549 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 ACO2Q99798 780 aaKnown RBP6.46□□□□□ -1.38
CPSF7-219ENST00000539952 FAM83CQ9BQN1 747 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 TCHPQ9BT92 498 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 SMOC1Q9H4F8 434 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 BRMS1Q9HCU9 246 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 PTPRHQ9HD43 1115 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 ANKFY1Q9P2R3 1169 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 IMPACTQ9P2X3 320 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 YIPF1Q9Y548 306 aa6.46□□□□□ -1.38
CPSF7-219ENST00000539952 SPAG17Q6Q759 2223 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 GREB1Q4ZG55 1949 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 CCDC66A2RUB6 948 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ARHGEF35A5YM69 484 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 UPK3BL1B0FP48 263 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 UPK3BL2E5RIL1 263 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 APBB3O95704 486 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TPM1P09493 284 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TNNT1P13805 278 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 SPINK2P20155 84 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 CYP3A5P20815 502 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 RPA1P27694 616 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 GABRR2P28476 465 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 HOXC13P31276 330 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 GBP1P32455 592 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF165P49910 485 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 DGKEP52429 567 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 OSTNP61366 133 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 IRX4P78413 519 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TNK2Q07912 1038 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 SMARCB1Q12824 385 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 NR1H3Q13133 447 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 HNRNPDQ14103 355 aaKnown RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TOB2Q14106 344 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms