RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 ATP2A3Q93084 1043 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 FSCN3Q9NQT6 498 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 MMP17Q9ULZ9 603 aa13.07□□□□□ -0.32
YBX3-207ENST00000539204 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 TK2O00142 265 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 SH3BP5O60239 455 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 NEMFO60524 1076 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 PRB1P04280 392 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 SYPP08247 313 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 HARSP12081 509 aaKnown RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 ATF6P18850 670 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 CYP3A5P20815 502 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 PROZP22891 400 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 IFNAR2P48551 515 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 AARSP49588 968 aaKnown RBP eCLIP13.06□□□□□ -0.32
YBX3-207ENST00000539204 NLRP12P59046 1061 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 MRPS21P82921 87 aaKnown RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 STK3Q13188 491 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 MTF1Q14872 753 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 SLC39A12Q504Y0 691 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 PEAR1Q5VY43 1037 aaPredicted RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 RABEPKQ7Z6M1 372 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 ZNF605Q86T29 641 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 TTC16Q8NEE8 873 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 RIN3Q8TB24 985 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 MRPS31Q92665 395 aaKnown RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 CAMK1GQ96NX5 476 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 UBL7Q96S82 380 aaPredicted RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 PLEKHA5Q9HAU0 1116 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 POLMQ9NP87 494 aaPredicted RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
YBX3-207ENST00000539204 BCCIPQ9P287 314 aaKnown RBP eCLIP13.06□□□□□ -0.32
YBX3-207ENST00000539204 APOBEC2Q9Y235 224 aaKnown RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
YBX3-207ENST00000539204 AP5Z1O43299 807 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 CDKL5O76039 1030 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 RPA1P27694 616 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 CDR1P51861 262 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 PEX3P56589 373 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 SPAG1Q07617 926 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 NR5A1Q13285 461 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 TOB2Q14106 344 aaPredicted RBP13.05□□□□□ -0.32
YBX3-207ENST00000539204 NBR1Q14596 966 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 EML3Q32P44 896 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 SEZ6Q53EL9 994 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 ERMNQ8TAM6 284 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 C2orf15Q8WU43 125 aaKnown RBP13.05□□□□□ -0.32
YBX3-207ENST00000539204 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 ZBTB45Q96K62 511 aaPredicted RBP13.05□□□□□ -0.32
YBX3-207ENST00000539204 BRMS1Q9HCU9 246 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 DNAAF2Q9NVR5 837 aaKnown RBP13.05□□□□□ -0.32
YBX3-207ENST00000539204 DKK4Q9UBT3 224 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 UBQLN1Q9UMX0 589 aaKnown RBP13.05□□□□□ -0.32
YBX3-207ENST00000539204 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
YBX3-207ENST00000539204 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
YBX3-207ENST00000539204 ABLIM1O14639 778 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 ODC1P11926 461 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 KRT2P35908 639 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 NPTX2P47972 431 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 SMARCB1Q12824 385 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 EFCAB13Q8IY85 973 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 TMEM130Q8N3G9 435 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 DEFB119Q8N690 84 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 OR2I1PQ8NGU4 316 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 SENP8Q96LD8 212 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 CYP2S1Q96SQ9 504 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
YBX3-207ENST00000539204 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 KIAA1522Q9P206 1035 aaPredicted RBP13.04□□□□□ -0.32
YBX3-207ENST00000539204 MAGED2Q9UNF1 606 aaPredicted RBP13.04□□□□□ -0.32
YBX3-207ENST00000539204 STK24Q9Y6E0 443 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 WNT6Q9Y6F9 365 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 KALRNO60229 2985 aa13.04□□□□□ -0.32
YBX3-207ENST00000539204 XPOTO43592 962 aaKnown RBP13.03□□□□□ -0.32
YBX3-207ENST00000539204 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
YBX3-207ENST00000539204 PLA2G2AP14555 144 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 HMGA1P17096 107 aaKnown RBP13.03□□□□□ -0.32
YBX3-207ENST00000539204 PAX3P23760 479 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 LILRA4P59901 499 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
YBX3-207ENST00000539204 ZBTB6Q15916 424 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 SLCO6A1Q86UG4 719 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 SCUBE3Q8IX30 993 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 THEM5Q8N1Q8 247 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 TXNDC5Q8NBS9 432 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms