RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 ARMCX1Q9P291 453 aa18.1■□□□□ 0.49
C2CD3-213ENST00000539061 COMMD3-BMI1R4GMX3 469 aa18.1■□□□□ 0.49
C2CD3-213ENST00000539061 DENND3A2RUS2 1198 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 IPO5O00410 1097 aaKnown RBP18.09■□□□□ 0.49
C2CD3-213ENST00000539061 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
C2CD3-213ENST00000539061 MT-ND3P03897 115 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 CPA2P48052 419 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 VCPP55072 806 aaKnown RBP18.09■□□□□ 0.49
C2CD3-213ENST00000539061 TMEM179Q6ZVK1 233 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 USP37Q86T82 979 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 MYLK4Q86YV6 388 aaPredicted RBP18.09■□□□□ 0.49
C2CD3-213ENST00000539061 CERS5Q8N5B7 392 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 POLIQ9UNA4 740 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 EXOC7Q9UPT5 735 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 H3BRJ5 948 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 IFNB1P01574 187 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 IL1BP01584 269 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 SH3BGRP55822 239 aaPredicted RBP18.09■□□□□ 0.49
C2CD3-213ENST00000539061 ATP13A4Q4VNC1 1196 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 MFSD7Q6UXD7 560 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 DCAKDQ8WVC6 231 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 PI4K2AQ9BTU6 479 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 PRR12Q9ULL5 1215 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 SCINQ9Y6U3 715 aa18.09■□□□□ 0.49
C2CD3-213ENST00000539061 C2orf71A6NGG8 1288 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 SGK1O00141 431 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 DDX39AO00148 427 aaKnown RBP18.08■□□□□ 0.49
C2CD3-213ENST00000539061 PEX3P56589 373 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 OASLQ15646 514 aaKnown RBP18.08■□□□□ 0.49
C2CD3-213ENST00000539061 AOC3Q16853 763 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 RIPOR1Q6ZS17 1223 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 MIER3Q7Z3K6 550 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 ST13P4Q8IZP2 240 aaPredicted RBP18.08■□□□□ 0.49
C2CD3-213ENST00000539061 HAPLN3Q96S86 360 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 RIT2Q99578 217 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 ZWILCHQ9H900 591 aa18.08■□□□□ 0.49
C2CD3-213ENST00000539061 PIAS1O75925 651 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 TM7SF2O76062 418 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 KRT1P04264 644 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 ITGAVP06756 1048 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 P4HBP07237 508 aaKnown RBP18.08■□□□□ 0.48
C2CD3-213ENST00000539061 BGNP21810 368 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 RARRES1P49788 294 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 ACTR3P61158 418 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 PLCB3Q01970 1234 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 APOBEC3HQ6NTF7 200 aaKnown RBP18.08■□□□□ 0.48
C2CD3-213ENST00000539061 TTC17Q96AE7 1141 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 VCPIP1Q96JH7 1222 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 TTC1Q99614 292 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 C1orf112Q9NSG2 853 aa18.08■□□□□ 0.48
C2CD3-213ENST00000539061 ZC3H11AO75152 810 aaKnown RBP eCLIP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 BBOX1O75936 387 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 BAG2O95816 211 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 ENO1P06733 434 aaKnown RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 DSG3P32926 999 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 ETV4P43268 484 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 CIAPIN1Q6FI81 312 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 PLEKHA7Q6IQ23 1121 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 MARK2Q7KZI7 788 aaKnown RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 PALM2Q8IXS6 379 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 RBM15BQ8NDT2 890 aaKnown RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 NKD2Q969F2 451 aaPredicted RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 ATXN10Q9UBB4 475 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 PI4KBQ9UBF8 816 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 IP6K2Q9UHH9 426 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 FARP1Q9Y4F1 1045 aaPredicted RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 FAM237BA0A1B0GVD1 139 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 CDC16Q13042 620 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 LSAMPQ13449 338 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 DNAL1Q4LDG9 190 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 HHIPL2Q6UWX4 724 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 TRIM72Q6ZMU5 477 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 ALYREFQ86V81 257 aaKnown RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 STKLD1Q8NE28 680 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 TEKT1Q969V4 418 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 MFSD14AQ96MC6 490 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 FAM111AQ96PZ2 611 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 PANX3Q96QZ0 392 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 TMEM121Q9BTD3 319 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 GPAMQ9HCL2 828 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 SNCAIPQ9Y6H5 919 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 IQANK1A0A1B0GTG1 560 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 CAPN14A8MX76 684 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 NCKAP1LP55160 1127 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 TBC1D10BQ4KMP7 808 aaPredicted RBP18.07■□□□□ 0.48
C2CD3-213ENST00000539061 SPOCD1Q6ZMY3 1216 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 RHPN2Q8IUC4 686 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 PPIL6Q8IXY8 311 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 ULK2Q8IYT8 1036 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 FEZF2Q8TBJ5 459 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 APOPT1Q96IL0 206 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 SENP7Q9BQF6 1050 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 COA1Q9GZY4 146 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 MIS12Q9H081 205 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 KCNK4Q9NYG8 393 aa18.07■□□□□ 0.48
C2CD3-213ENST00000539061 STRIP2Q9ULQ0 834 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms