RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 PP2D1A8MPX8 630 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 LAD1O00515 517 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 PIRO00625 290 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 CDX4O14627 284 aaPredicted RBP15.25■□□□□ 0.03
PBX3-212ENST00000538998 HNRNPDLO14979 420 aaKnown RBP15.25■□□□□ 0.03
PBX3-212ENST00000538998 FAM189A1O60320 539 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 TOP3BO95985 862 aaKnown RBP15.25■□□□□ 0.03
PBX3-212ENST00000538998 HMGA1P17096 107 aaKnown RBP15.25■□□□□ 0.03
PBX3-212ENST00000538998 SCP2P22307 547 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 U2AF2P26368 475 aaKnown RBP eCLIP15.25■□□□□ 0.03
PBX3-212ENST00000538998 PSMD2Q13200 908 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 NBR1Q14596 966 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 NAIF1Q69YI7 327 aaPredicted RBP15.25■□□□□ 0.03
PBX3-212ENST00000538998 JADE1Q6IE81 842 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 DCP1BQ8IZD4 617 aaKnown RBP15.25■□□□□ 0.03
PBX3-212ENST00000538998 KCTD17Q8N5Z5 321 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 RIN3Q8TB24 985 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 KCNN1Q92952 543 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 ABI2Q9NYB9 513 aaPredicted RBP15.25■□□□□ 0.03
PBX3-212ENST00000538998 DERAQ9Y315 318 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 LAMA1P25391 3075 aa15.25■□□□□ 0.03
PBX3-212ENST00000538998 TSC2P49815 1807 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 IGF2RP11717 2491 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 ANO9A1A5B4 782 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 CYB561D2O14569 222 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 CSH1P0DML2 217 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 CSH2P0DML3 217 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 CDC25AP30304 524 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 PRPHP41219 470 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 CDR1P51861 262 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 NCKAP1LP55160 1127 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 LMAN2Q12907 356 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 MTF1Q14872 753 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 TMEM132DQ14C87 1099 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 LRSAM1Q6UWE0 723 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 FBXO18Q8NFZ0 1043 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 OSCP1Q8WVF1 389 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 EZH1Q92800 747 aaPredicted RBP15.24■□□□□ 0.03
PBX3-212ENST00000538998 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 PYM1Q9BRP8 204 aaKnown RBP15.24■□□□□ 0.03
PBX3-212ENST00000538998 MMTAG2Q9BU76 263 aaKnown RBP15.24■□□□□ 0.03
PBX3-212ENST00000538998 TPSD1Q9BZJ3 242 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 SLC32A1Q9H598 525 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 DUS2Q9NX74 493 aaKnown RBP15.24■□□□□ 0.03
PBX3-212ENST00000538998 UXTQ9UBK9 157 aaPredicted RBP15.24■□□□□ 0.03
PBX3-212ENST00000538998 EVLQ9UI08 416 aaPredicted RBP15.24■□□□□ 0.03
PBX3-212ENST00000538998 NEUROG3Q9Y4Z2 214 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 PCDHB5Q9Y5E4 795 aa15.24■□□□□ 0.03
PBX3-212ENST00000538998 ZFYVE26Q68DK2 2539 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 PATE3B3GLJ2 98 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 PIGRP01833 764 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 NEFLP07196 543 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 NFICP08651 508 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 IFNAR2P48551 515 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 TAF6P49848 677 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 FAM160A1Q05DH4 1040 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 RING1Q06587 406 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 NR1H3Q13133 447 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 UAP1L1Q3KQV9 507 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 LRRTM3Q86VH5 581 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 RASSF3Q86WH2 238 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 SYT2Q8N9I0 419 aaPredicted RBP15.23■□□□□ 0.03
PBX3-212ENST00000538998 DEFB124Q8NES8 71 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 CNOT6LQ96LI5 555 aaKnown RBP15.23■□□□□ 0.03
PBX3-212ENST00000538998 MSTO1Q9BUK6 570 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 TMEM206Q9H813 350 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 CPSF3Q9UKF6 684 aaKnown RBP15.23■□□□□ 0.03
PBX3-212ENST00000538998 MAGED2Q9UNF1 606 aaPredicted RBP15.23■□□□□ 0.03
PBX3-212ENST00000538998 LHX6Q9UPM6 363 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 INVSQ9Y283 1065 aa15.23■□□□□ 0.03
PBX3-212ENST00000538998 A0A0B4J269 797 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 DHPSP49366 369 aaPredicted RBP15.22■□□□□ 0.03
PBX3-212ENST00000538998 NEK4P51957 841 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 IRX4P78413 519 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 USP4Q13107 963 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
PBX3-212ENST00000538998 ZNF77Q15935 545 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 HYIQ5T013 277 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 WSCD1Q658N2 575 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 ANO7Q6IWH7 933 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 DTHD1Q6ZMT9 781 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 TRMT2BQ96GJ1 504 aaKnown RBP15.22■□□□□ 0.03
PBX3-212ENST00000538998 LLPHQ9BRT6 129 aaKnown RBP15.22■□□□□ 0.03
PBX3-212ENST00000538998 ASB7Q9H672 318 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 MSRB2Q9Y3D2 182 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 C2CD2Q9Y426 696 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
PBX3-212ENST00000538998 TRAV19A0A0A6YYK7 116 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 PRPF40AO75400 957 aaKnown RBP15.21■□□□□ 0.03
PBX3-212ENST00000538998 CKMP06732 381 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 USP17L7P0C7H9 530 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 BCKDHBP21953 392 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 SLC12A3P55017 1021 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 TSPY1Q01534 308 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 IL17AQ16552 155 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 NFE2Q16621 373 aaPredicted RBP15.21■□□□□ 0.03
PBX3-212ENST00000538998 EML3Q32P44 896 aa15.21■□□□□ 0.03
PBX3-212ENST00000538998 TRIM61Q5EBN2 209 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms