RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RASAL1O95294 804 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 A1BGP04217 495 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 FGFR4P22455 802 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PAX3P23760 479 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PDIA3P30101 505 aaKnown RBP6.4□□□□□ -1.38
PRKDC-208ENST00000536710 GCLCP48506 637 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PTDSS1P48651 473 aaKnown RBP6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PXNP49023 591 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-208ENST00000536710 CPT1AP50416 773 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 SCNN1GP51170 649 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 ARHGEF7Q14155 803 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PFKFB4Q16877 469 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 TMEM95Q3KNT9 176 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 ZACNQ401N2 412 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 HS1BP3Q53T59 392 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PRR16Q569H4 304 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 METRNLQ641Q3 311 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 VGLL2Q8N8G2 317 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 IPO4Q8TEX9 1081 aaKnown RBP6.4□□□□□ -1.38
PRKDC-208ENST00000536710 SNX27Q96L92 541 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 DCLRE1CQ96SD1 692 aaKnown RBP6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PAGR1Q9BTK6 254 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.4□□□□□ -1.38
PRKDC-208ENST00000536710 TM7SF3Q9NS93 570 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 RNF181Q9P0P0 153 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 PCDHGB3Q9Y5G1 929 aa6.4□□□□□ -1.38
PRKDC-208ENST00000536710 RGS10O43665 173 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 ZNF623O75123 536 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 RPS6KA4O75676 772 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 RECQL4O94761 1208 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 ITGALP20701 1170 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 RENBPP51606 427 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 PDCD4Q53EL6 469 aaKnown RBP6.39□□□□□ -1.39
PRKDC-208ENST00000536710 ZFYVE27Q5T4F4 411 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 NAIF1Q69YI7 327 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-208ENST00000536710 TLDC1Q6P9B6 456 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 TMEM108Q6UXF1 575 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 LCNL1Q6ZST4 164 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 GAS2L3Q86XJ1 694 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 ZNF280BQ86YH2 543 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 GLIS1Q8NBF1 620 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 CPT1CQ8TCG5 803 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 Q8TCH9 128 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 LRIG1Q96JA1 1093 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 MED15Q96RN5 788 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 RMDN3Q96TC7 470 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 MESP1Q9BRJ9 268 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 AS3MTQ9HBK9 375 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
PRKDC-208ENST00000536710 PARD6AQ9NPB6 346 aa6.39□□□□□ -1.39
PRKDC-208ENST00000536710 VSX1Q9NZR4 365 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-208ENST00000536710 CCDC78A2IDD5 438 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 AQP12BA6NM10 295 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 LGALS16A8MUM7 142 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 PATE3B3GLJ2 98 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 DIRC3C9JPN6 131 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 PIP5K1BO14986 540 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 CCP110O43303 1012 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 KCNA2P16389 499 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 TOB1P50616 345 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-208ENST00000536710 ZNF134P52741 427 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 COPAP53621 1224 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 PRKAG1P54619 331 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 LOXL3P58215 753 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 MC2RQ01718 297 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 OCA2Q04671 838 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 RAB30Q15771 203 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 PLAG1Q6DJT9 500 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 CRTC1Q6UUV9 634 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 MAMDC4Q6UXC1 1216 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 GDF7Q7Z4P5 450 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 KCTD20Q7Z5Y7 419 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 CLNKQ7Z7G1 428 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 MAPKAPK5Q8IW41 473 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 ZNF483Q8TF39 744 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-208ENST00000536710 EVI5LQ96CN4 794 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 ADOQ96SZ5 270 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 DEF6Q9H4E7 631 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 XPNPEP3Q9NQH7 507 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 DACT1Q9NYF0 836 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 RGL1Q9NZL6 768 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRKDC-208ENST00000536710 DGKBQ9Y6T7 804 aa6.38□□□□□ -1.39
PRKDC-208ENST00000536710 XDHP47989 1333 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 hCG_1984214I3L0E3 225 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 TLR5O60602 858 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 PIAS2O75928 621 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 SUN1O94901 812 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 GABRB3P28472 473 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 LRPAP1P30533 357 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 FPGSQ05932 587 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 GALNT1Q10472 559 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-208ENST00000536710 SPARCL1Q14515 664 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 RRP1BQ14684 758 aaKnown RBP6.37□□□□□ -1.39
PRKDC-208ENST00000536710 KCNAB1Q14722 419 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 FCRL6Q6DN72 434 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 LDHAL6AQ6ZMR3 332 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 Q6ZSN1 163 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 USP49Q70CQ1 688 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 HTR3DQ70Z44 454 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms