RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ZDBF2Q9HCK1 2354 aa15.29■□□□□ 0.04
UBE3B-206ENST00000536398 ZNF318Q5VUA4 2279 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 ECI2O75521 394 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 KIF20AO95235 890 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 GABRR2P28476 465 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 SMARCB1Q12824 385 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 ADAM9Q13443 819 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 GRM2Q14416 872 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 NFIL3Q16649 462 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 ISM2Q6H9L7 571 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 LEMD2Q8NC56 503 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 PRSS33Q8NF86 280 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 SPATA20Q8TB22 786 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 SPATA18Q8TC71 538 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 RSPRY1Q96DX4 576 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 ASB16Q96NS5 453 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 DPEP3Q9H4B8 488 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 IL21Q9HBE4 155 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.28■□□□□ 0.042e-9■■■■■ 409.2
UBE3B-206ENST00000536398 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
UBE3B-206ENST00000536398 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
UBE3B-206ENST00000536398 TRIM49P0CI25 452 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 TRIM49CP0CI26 452 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 HMGA1P17096 107 aaKnown RBP15.27■□□□□ 0.04
UBE3B-206ENST00000536398 PCSK1P29120 753 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 GNL1P36915 607 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-206ENST00000536398 RAP1GAPP47736 663 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 CDH8P55286 799 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 TNNC1P63316 161 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 CYP4F8P98187 520 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 NCOA4Q13772 614 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 NFE2Q16621 373 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-206ENST00000536398 ASTLQ6HA08 431 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-206ENST00000536398 SV2AQ7L0J3 742 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 ITIH5Q86UX2 942 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 OR6B3Q8NGW1 331 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 ZSCAN18Q8TBC5 510 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-206ENST00000536398 TMC2Q8TDI7 906 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 SMARCD2Q92925 531 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 MYLPFQ96A32 169 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 ELSPBP1Q96BH3 223 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 SYT15Q9BQS2 421 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 MKNK1Q9BUB5 465 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 SDCBP2Q9H190 292 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 ATXN3LQ9H3M9 355 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 SMYD3Q9H7B4 428 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 ZFP14Q9HCL3 533 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 CDH9Q9ULB4 789 aa15.27■□□□□ 0.04
UBE3B-206ENST00000536398 COL4A3Q01955 1670 aa15.27■□□□□ 0.03
UBE3B-206ENST00000536398 STK25O00506 426 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 LRRN2O75325 713 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 TACC1O75410 805 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 STAU1O95793 577 aaKnown RBP15.26■□□□□ 0.03
UBE3B-206ENST00000536398 ATICP31939 592 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 VAMP7P51809 220 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 AP3M2P53677 418 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
UBE3B-206ENST00000536398 PPP3CAQ08209 521 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 VEPH1Q14D04 833 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 ZNF699Q32M78 642 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 ZACNQ401N2 412 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 GPR158Q5T848 1215 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 ZNF658Q5TYW1 1059 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-206ENST00000536398 SPOPLQ6IQ16 392 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 VITQ6UXI7 678 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 SCARA5Q6ZMJ2 495 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 TMEM150AQ86TG1 271 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 SPATA2LQ8IUW3 424 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-206ENST00000536398 FAM186BQ8IYM0 893 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 SMARCE1Q969G3 411 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 SYAP1Q96A49 352 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-206ENST00000536398 CCDC34Q96HJ3 373 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 GSDMAQ96QA5 445 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 SNX25Q9H3E2 840 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 SLITRK6Q9H5Y7 841 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 ARHGEF3Q9NR81 526 aa15.26■□□□□ 0.03
UBE3B-206ENST00000536398 MAGED2Q9UNF1 606 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-206ENST00000536398 CLSTN1O94985 981 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 SMC2O95347 1197 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 BDNFP23560 247 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 GCLMP48507 274 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 CLCN5P51795 746 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 CYP27A1Q02318 531 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 TCF15Q12870 199 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 TAF12Q16514 161 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 SLC44A4Q53GD3 710 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 MDH1BQ5I0G3 518 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 ANKRD40Q6AI12 368 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 ARID3BQ8IVW6 561 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-206ENST00000536398 SCN4BQ8IWT1 228 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 SLC46A2Q9BY10 475 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 SMG9Q9H0W8 520 aaKnown RBP15.25■□□□□ 0.03
UBE3B-206ENST00000536398 MMRN2Q9H8L6 949 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 TBC1D17Q9HA65 648 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 ABCB6Q9NP58 842 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 RMND1Q9NWS8 449 aa15.25■□□□□ 0.03
UBE3B-206ENST00000536398 MAGEC2Q9UBF1 373 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms