RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 NAP1L3Q99457 506 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 KLF6Q99612 283 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 BTBD10Q9BSF8 475 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 RBM38Q9H0Z9 239 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 CCDC134Q9H6E4 229 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PALMDQ9NP74 551 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 VTA1Q9NP79 307 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 OSGEPQ9NPF4 335 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 NDE1Q9NXR1 346 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 DDX43Q9NXZ2 648 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 DKK3Q9UBP4 350 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 HEY2Q9UBP5 337 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ARMCX3Q9UH62 379 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 AGO2Q9UKV8 859 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 MTUS1Q9ULD2 1270 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 NEU2Q9Y3R4 380 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CORINQ9Y5Q5 1042 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PCNTO95613 3336 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 GOLGA8RI6L899 631 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PIK3R2O00459 728 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CAMTA2O94983 1202 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 GH2P01242 217 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ACTN1P12814 892 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CETN2P41208 172 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CTBSQ01459 385 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 FOLH1Q04609 750 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 SPAG1Q07617 926 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 SSRP1Q08945 709 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 CTTNQ14247 550 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 KRT72Q14CN4 511 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TMED2Q15363 201 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 GRIK5Q16478 980 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ASTE1Q2TB18 679 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 C6orf118Q5T5N4 469 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TTI2Q6NXR4 508 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PDXDC2PQ6P474 469 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CCDC81Q6ZN84 652 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TAOK1Q7L7X3 1001 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 BTLAQ7Z6A9 289 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ALYREFQ86V81 257 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 RALGPS2Q86X27 583 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 CLVS1Q8IUQ0 354 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 ZDHHC14Q8IZN3 488 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CRACR2BQ8N4Y2 399 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 EXD1Q8NHP7 514 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 RAB3IL1Q8TBN0 382 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 C10orf82Q8WW14 230 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 BAP1Q92560 729 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 INPP5DQ92835 1189 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ZNF594Q96JF6 807 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 FAR2Q96K12 515 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 C2orf49Q9BVC5 232 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 KLHL25Q9H0H3 589 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CDC42EP4Q9H3Q1 356 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 LGR6Q9HBX8 967 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TUBA8Q9NY65 449 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 RRN3Q9NYV6 651 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 GRHL1Q9NZI5 618 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 SAP30BPQ9UHR5 308 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 TACC3Q9Y6A5 838 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PITPNM2Q9BZ72 1349 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 A0A1W2PQC6 194 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 POC1B-GALNT4F8VUJ3 575 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MEN1O00255 615 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ZBTB43O43298 467 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 KLHL41O60662 606 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 SEC24DO94855 1032 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 GAS8O95995 478 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CDH3P22223 829 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CES1P23141 567 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 GNA11P29992 359 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ADSLP30566 484 aaPredicted RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 SKIV2L2P42285 1042 aaKnown RBP3.91□□□□□ -1.78
MCF2-210ENST00000536274 GSSP48637 474 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MARCKSL1P49006 195 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 EPHB1P54762 984 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ARHGAP4P98171 946 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MOGSQ13724 837 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TRIP10Q15642 601 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 SLC1A5Q15758 541 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 MAPK6Q16659 721 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 GSTA3Q16772 222 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PHKG1Q16816 387 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 ANO4Q32M45 955 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CCDC153Q494R4 210 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 CCDC152Q4G0S7 254 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 SLC45A4Q5BKX6 768 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PERM1Q5SV97 790 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 C6orf52Q5T4I8 152 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 UBE2UQ5VVX9 321 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 KAZNQ674X7 775 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PRR5LQ6MZQ0 368 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 TTC27Q6P3X3 843 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 OTOAQ7RTW8 1153 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 VPS36Q86VN1 386 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 PDSS2Q86YH6 399 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 JAMLQ86YT9 394 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 LRRC43Q8N309 656 aa3.91□□□□□ -1.78
MCF2-210ENST00000536274 KBTBD3Q8NAB2 608 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms