RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 COL20A1Q9P218 1284 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ATXN7L1Q9ULK2 861 aaPredicted RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 TPX2Q9ULW0 747 aaKnown RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 EXOC7Q9UPT5 735 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 INPP5FQ9Y2H2 1132 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 NEU2Q9Y3R4 380 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ZHX2Q9Y6X8 837 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 COL11A2P13942 1736 aaPredicted RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CNTNAP1P78357 1384 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ASTN2O75129 1339 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 AFF2P51816 1311 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 DCDC2BA2VCK2 349 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 YDJCA8MPS7 323 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 KHNYNO15037 678 aaKnown RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 EFSO43281 561 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SPOPO43791 374 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SNX3O60493 162 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ECEL1O95672 775 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 MMP10P09238 476 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 MYBL1P10243 752 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 NEFHP12036 1026 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 BMP4P12644 408 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 UNGP13051 313 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 IBSPP21815 317 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ATP5DP30049 168 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ADSSP30520 456 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SLC1A1P43005 524 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 PDE6CP51160 858 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 PSMC5P62195 406 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 UBXN2AP68543 259 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ELF3P78545 371 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SPP2Q13103 211 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 LAMC2Q13753 1193 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 PTK6Q13882 451 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SNCBQ16143 134 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 KCTD19Q17RG1 926 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TKFCQ3LXA3 575 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 UBAP2Q5T6F2 1119 aaKnown RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TTC39BQ5VTQ0 682 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 VSTM1Q6UX27 236 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 RNF207Q6ZRF8 634 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 C15orf39Q6ZRI6 1047 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TSHZ1Q6ZSZ6 1077 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TAOK1Q7L7X3 1001 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SLC47A2Q86VL8 602 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF677Q86XU0 584 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 CPNE8Q86YQ8 564 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 MCF2L2Q86YR7 1114 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC105Q8IYK2 499 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TMEM161BQ8NDZ6 487 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ZSWIM2Q8NEG5 633 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SUPT20HQ8NEM7 779 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 IL31RAQ8NI17 732 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 EPS8L3Q8TE67 593 aaKnown RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 CKAP2Q8WWK9 683 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 KIFAP3Q92845 792 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF653Q96CK0 615 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 NT5C1BQ96P26 610 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 MYCBPQ99417 103 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 PAIP2Q9BPZ3 127 aaKnown RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SELENOSQ9BQE4 189 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SENP7Q9BQF6 1050 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 PLVAPQ9BX97 442 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 FOXP3Q9BZS1 431 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 DCLK3Q9C098 648 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 CHRDQ9H2X0 955 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 CDC42EP4Q9H3Q1 356 aaKnown RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 C17orf75Q9HAS0 396 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 GOLGA2P5Q9HBQ8 144 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 CD248Q9HCU0 757 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 KCNH7Q9NS40 1196 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 HOMER3Q9NSC5 361 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TBC1D22BQ9NU19 505 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 HAUS2Q9NVX0 235 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TMOD2Q9NZR1 351 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF70Q9UC06 446 aaPredicted RBP6.09□□□□□ -1.43
VPS33A-203ENST00000536212 PGAP2Q9UHJ9 254 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 LGALS13Q9UHV8 139 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 MCM8Q9UJA3 840 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 TBX20Q9UMR3 447 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 PPME1Q9Y570 386 aa6.09□□□□□ -1.43
VPS33A-203ENST00000536212 SCN9AQ15858 1988 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 DDX39AO00148 427 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 O00370 1275 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 PLSCR1O15162 318 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SLC16A4O15374 487 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 STBD1O95210 358 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 TTC4O95801 387 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CYP1A1P04798 512 aaPredicted RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 ABHD2P08910 425 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 ALADP13716 330 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 GARTP22102 1010 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 FGFR4P22455 802 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 EIF4BP23588 611 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 YWHABP31946 246 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SFNP31947 248 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 KCNJ1P48048 391 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 JAK3P52333 1124 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms