RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 GABRDO14764 452 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 TGFB1I1O43294 461 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 ITGB3P05106 788 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 HAPLN1P10915 354 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-202ENST00000535685 MYL4P12829 197 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 PSMC3P17980 439 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 RFX1P22670 979 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 POLR2BP30876 1174 aaKnown RBP11.61□□□□□ -0.55
CCDC60-202ENST00000535685 ME1P48163 572 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 SNW1Q13573 536 aaKnown RBP11.61□□□□□ -0.55
CCDC60-202ENST00000535685 PKP1Q13835 747 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 TEAD2Q15562 447 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 NFE2Q16621 373 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-202ENST00000535685 TUSC1Q2TAM9 212 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 SLC39A12Q504Y0 691 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 VITQ6UXI7 678 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 GAREM2Q75VX8 874 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 PDCL2Q8N4E4 241 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 TTC9BQ8N6N2 239 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 TOP6BLQ8N6T0 577 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 ST13P5Q8NFI4 369 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-202ENST00000535685 ZSCAN18Q8TBC5 510 aaPredicted RBP11.61□□□□□ -0.55
CCDC60-202ENST00000535685 SCFD1Q8WVM8 642 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 IRF7Q92985 503 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 ANKRD36BP1Q96IX9 119 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 MKNK1Q9BUB5 465 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 TRMT61BQ9BVS5 477 aaKnown RBP11.61□□□□□ -0.55
CCDC60-202ENST00000535685 PCIF1Q9H4Z3 704 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 ABCB6Q9NP58 842 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 LTB4R2Q9NPC1 389 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 FAM86C1Q9NVL1 165 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 HSPBP1Q9NZL4 362 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 USP25Q9UHP3 1055 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 L1RE1Q9UN81 338 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 AGAP1Q9UPQ3 857 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 SLC27A5Q9Y2P5 690 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 GPR179Q6PRD1 2367 aa11.61□□□□□ -0.55
CCDC60-202ENST00000535685 ARNTLO00327 626 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 MAN2B1O00754 1011 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 HUS1O60921 280 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 MYL1P05976 194 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 TMEM191BP0C7N4 346 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 ATF6P18850 670 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 CMA1P23946 247 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 RPS9P46781 194 aaKnown RBP11.6□□□□□ -0.55
CCDC60-202ENST00000535685 LHX1P48742 406 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 TSPY1Q01534 308 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 DNM1Q05193 864 aaKnown RBP11.6□□□□□ -0.55
CCDC60-202ENST00000535685 FCHO2Q0JRZ9 810 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 VEPH1Q14D04 833 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 DUOXA2Q1HG44 320 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
CCDC60-202ENST00000535685 C1orf228Q6PIY5 440 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 CBWD2Q8IUF1 395 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 WDR49Q8IV35 697 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 C1orf210Q8IVY1 113 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
CCDC60-202ENST00000535685 HPS3Q969F9 1004 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 MSANTD3Q96H12 275 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 PKMYT1Q99640 499 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 FOXQ1Q9C009 403 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 BRD9Q9H8M2 597 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 ZNF334Q9HCZ1 680 aaPredicted RBP11.6□□□□□ -0.55
CCDC60-202ENST00000535685 AGPAT3Q9NRZ7 376 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
CCDC60-202ENST00000535685 PCDHB5Q9Y5E4 795 aa11.6□□□□□ -0.55
CCDC60-202ENST00000535685 FAM237AA0A1B0GTK4 181 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 A0A1W2PRU2 124 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 HEPACAM2A8MVW5 462 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 CHADO15335 359 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 NCAM2O15394 837 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 KLRC4O43908 158 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 GFRA3O60609 400 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 PRPF40AO75400 957 aaKnown RBP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 STAU1O95793 577 aaKnown RBP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 TNNC2P02585 160 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 DCNP07585 359 aaKnown RBP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 GJA1P17302 382 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 PCSK1P29120 753 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 CDC25CP30307 473 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 MYL7Q01449 175 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 MYO1EQ12965 1108 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 PSMD2Q13200 908 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 FZD5Q13467 585 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 PSMD6Q15008 389 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 SNRNP35Q16560 246 aaKnown RBP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 KNOP1Q1ED39 458 aaKnown RBP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 ZNF528Q3MIS6 628 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 MGAT5BQ3V5L5 792 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 TMEM259Q4ZIN3 620 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 INTS6LQ5JSJ4 861 aaKnown RBP11.59□□□□□ -0.55
CCDC60-202ENST00000535685 FAM171BQ6P995 826 aa11.59□□□□□ -0.55
CCDC60-202ENST00000535685 ZNF852Q6ZMS4 543 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms