RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 EEPD1Q7L9B9 569 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 NUDCD3Q8IVD9 361 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 C12orf50Q8NA57 414 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-232ENST00000535094 GMCL1P1Q8NEA9 526 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
MCF2L-232ENST00000535094 NDE1Q9NXR1 346 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 PRKAG3Q9UGI9 489 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 GRID1Q9ULK0 1009 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 BHMG1C9JSJ3 638 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-232ENST00000535094 SPECC1L-ADORA2AF8WAN1 911 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 CHRNA5P30532 468 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 FAAP100Q0VG06 881 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 CUL2Q13617 745 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 NCOA4Q13772 614 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 KLHL38Q2WGJ6 581 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 ARMC3Q5W041 872 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 IZUMO2Q6UXV1 221 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 CDAN1Q8IWY9 1227 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.68■□□□□ 0.26
MCF2L-232ENST00000535094 POU5F2Q8N7G0 328 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 TMEM35BQ8NCS4 154 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 APOL6Q9BWW8 343 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 PCMTD2Q9NV79 361 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 UMODL1Q5DID0 1318 aa16.68■□□□□ 0.26
MCF2L-232ENST00000535094 PSTPIP1O43586 416 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 AVILO75366 819 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 USP1O94782 785 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 RANBP1P43487 201 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 PSMC1P62191 440 aaKnown RBP16.67■□□□□ 0.26
MCF2L-232ENST00000535094 MROH9Q5TGP6 573 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 PRPF39Q86UA1 669 aaKnown RBP16.67■□□□□ 0.26
MCF2L-232ENST00000535094 EFCAB3Q8N7B9 438 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 TMEM161BQ8NDZ6 487 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 OLIG1Q8TAK6 271 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 PPP1R36Q96LQ0 422 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 RAB6BQ9NRW1 208 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 APRTP07741 180 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 ETS2P15036 469 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 KRT81Q14533 505 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 PPP6R3Q5H9R7 873 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-232ENST00000535094 MCF2L2Q86YR7 1114 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 BSNDQ8WZ55 320 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 INPP5DQ92835 1189 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 ATP6V0A1Q93050 837 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 TBC1D22BQ9NU19 505 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 COL20A1Q9P218 1284 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 FAM155BO75949 473 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 CCNB1P14635 433 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 NPR1P16066 1061 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 ELK3P41970 407 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 GPC3P51654 580 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 GTF2BQ00403 316 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 CHI3L2Q15782 390 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 PARP6Q2NL67 630 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 SLC45A4Q5BKX6 768 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 ACSBG2Q5FVE4 666 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 WASHC2DQ5SRD0 308 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 C4orf50Q6ZRC1 276 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 SPATA18Q8TC71 538 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 CRYGNQ8WXF5 182 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
MCF2L-232ENST00000535094 TMEM191BP0C7N4 346 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 SKIV2L2P42285 1042 aaKnown RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 VCPP55072 806 aaKnown RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 SLC27A3Q5K4L6 730 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ENOSF1Q7L5Y1 443 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ANKS1BQ7Z6G8 1248 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ZNF606Q8WXB4 792 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 SLC7A6OSQ96CW6 309 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ANGPTL2Q9UKU9 493 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ZNF200P98182 395 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 SDCCAG8Q86SQ7 713 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 RSPH3Q86UC2 560 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 RASSF3Q86WH2 238 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 C10orf82Q8WW14 230 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ZNF395Q9H8N7 513 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 NGRNQ9NPE2 291 aaKnown RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 PCDHA10Q9Y5I2 948 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 KRT3P12035 628 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 SLC34A1Q06495 639 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 BAATQ14032 418 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 MORF4L2Q15014 288 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 KBTBD12Q3ZCT8 623 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 TFDP3Q5H9I0 405 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 CRLF3Q8IUI8 442 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 ASAP3Q8TDY4 903 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 C7orf43Q8WVR3 580 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 WDR60Q8WVS4 1066 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 NMUR2Q9GZQ4 415 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 IFT122Q9HBG6 1241 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 AGO4Q9HCK5 861 aaKnown RBP16.66■□□□□ 0.26
MCF2L-232ENST00000535094 TXNDC16Q9P2K2 825 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 LGALS13Q9UHV8 139 aa16.66■□□□□ 0.26
MCF2L-232ENST00000535094 PSMG1O95456 288 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 MYBPC2Q14324 1141 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 TMEM63BQ5T3F8 832 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.65■□□□□ 0.263e-6■□□□□ 10.2
MCF2L-232ENST00000535094 ATXN7L3BQ96GX2 97 aa16.65■□□□□ 0.26
MCF2L-232ENST00000535094 PIH1D1Q9NWS0 290 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms