RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 RAPGEF5Q92565 580 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 LRRC19Q9H756 370 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 IP6K2Q9UHH9 426 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 M0QYV0 167 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 VPS41P49754 854 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 CLUL1Q15846 466 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 PPP2R5EQ16537 467 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 SMTNL2Q2TAL5 461 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 RAB6CQ53S08 254 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 MFSD7Q6UXD7 560 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 PIWIL1Q96J94 861 aaKnown RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 OSBPL8Q9BZF1 889 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 RAB6CQ9H0N0 254 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 GOLGA2P5Q9HBQ8 144 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLP1-205ENST00000533682 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
CLP1-205ENST00000533682 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 SNX9Q9Y5X1 595 aa12.62□□□□□ -0.39
CLP1-205ENST00000533682 SMIM35A0A1B0GVV1 85 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 PSTPIP1O43586 416 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 OPA1O60313 960 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 RECQL4O94761 1208 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 KRT3P12035 628 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 IGFBP6P24592 240 aaPredicted RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 YWHAEP62258 255 aaKnown RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 RBP5P82980 135 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 KRT17Q04695 432 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 SNX17Q15036 470 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 PPP1R7Q15435 360 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 LEKR1Q6ZMV7 388 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 KATNAL2Q8IYT4 538 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 C3orf20Q8ND61 904 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 UHMK1Q8TAS1 419 aaKnown RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 TRIM6Q9C030 488 aaPredicted RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 ZNF518BQ9C0D4 1074 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 EPB41L4BQ9H329 900 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 SYNCQ9H7C4 482 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 ITGA11Q9UKX5 1188 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLP1-205ENST00000533682 HAS3O00219 553 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 PAEPP09466 180 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 C6orf222P0C671 652 aaPredicted RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 ATICP31939 592 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 GPD2P43304 727 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 ATP1A2P50993 1020 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 CAP1Q01518 475 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 ZNF844Q08AG5 666 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 FAM182AQ5T1J6 154 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 SH3PXD2AQ5TCZ1 1133 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 NOTUMQ6P988 496 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 ACOT1Q86TX2 421 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 SESTD1Q86VW0 696 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 XYLT1Q86Y38 959 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 C12orf50Q8NA57 414 aaPredicted RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 FAM76AQ8TAV0 307 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 PPM1EQ8WY54 764 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLP1-205ENST00000533682 HAUS1Q96CS2 278 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 SNX27Q96L92 541 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 PWWP2AQ96N64 755 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 PLVAPQ9BX97 442 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 TXLNGYQ9BZA5 131 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 DCLK3Q9C098 648 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 AP5M1Q9H0R1 490 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 LHX5Q9H2C1 402 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 VRTNQ9H8Y1 702 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 METTL5Q9NRN9 209 aaKnown RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 FAM49BQ9NUQ9 324 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 SAE1Q9UBE0 346 aaPredicted RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 BARX2Q9UMQ3 279 aaPredicted RBP12.61□□□□□ -0.39
CLP1-205ENST00000533682 ZNF236Q9UL36 1845 aa12.61□□□□□ -0.39
CLP1-205ENST00000533682 FAM155AB1AL88 458 aaPredicted RBP12.6□□□□□ -0.39
CLP1-205ENST00000533682 PODXLO00592 558 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 GRAP2O75791 330 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 ECEL1O95672 775 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 PGK1P00558 417 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 SHBGP04278 402 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 IL1R2P27930 398 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 NFX1Q12986 1120 aaKnown RBP12.6□□□□□ -0.39
CLP1-205ENST00000533682 TRIM32Q13049 653 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 TAF5Q15542 800 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 ZBTB6Q15916 424 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 ZNF618Q5T7W0 954 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 CCDC91Q7Z6B0 441 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
CLP1-205ENST00000533682 ARRDC4Q8NCT1 418 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 LRRC45Q96CN5 670 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 SEMA4AQ9H3S1 761 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 RABEP2Q9H5N1 569 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 ZWILCHQ9H900 591 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
CLP1-205ENST00000533682 CACNG4Q9UBN1 327 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 RASAL2Q9UJF2 1139 aa12.6□□□□□ -0.39
CLP1-205ENST00000533682 GABRQQ9UN88 632 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms