RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CYP2C8P10632 490 aa18.33■□□□□ 0.53
PHRF1-205ENST00000533464 DSG3P32926 999 aa18.33■□□□□ 0.53
PHRF1-205ENST00000533464 CPT1AP50416 773 aa18.33■□□□□ 0.53
PHRF1-205ENST00000533464 TFDP3Q5H9I0 405 aa18.33■□□□□ 0.53
PHRF1-205ENST00000533464 EPS8L3Q8TE67 593 aaKnown RBP18.33■□□□□ 0.53
PHRF1-205ENST00000533464 C20orf96Q9NUD7 363 aaPredicted RBP18.33■□□□□ 0.53
PHRF1-205ENST00000533464 E2F8A0AVK6 867 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 KRT4P19013 534 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 SPRP35270 261 aaPredicted RBP18.33■□□□□ 0.52
PHRF1-205ENST00000533464 RAD51Q06609 339 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 KRT33BQ14525 404 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 PCSK7Q16549 785 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 COBLL1Q53SF7 1204 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 FAM167BQ9BTA0 163 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.521e-6■□□□□ 10.4
PHRF1-205ENST00000533464 EPHB2P29323 1055 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 GEMIN4P57678 1058 aaKnown RBP18.33■□□□□ 0.52
PHRF1-205ENST00000533464 RABGAP1LQ5R372 815 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 MAPTP10636 758 aaKnown RBP18.33■□□□□ 0.52
PHRF1-205ENST00000533464 RARGP13631 454 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 MROH9Q5TGP6 573 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 SPATC1LQ9H0A9 340 aa18.33■□□□□ 0.52
PHRF1-205ENST00000533464 ADARB2Q9NS39 739 aaKnown RBP18.33■□□□□ 0.52
PHRF1-205ENST00000533464 RNF103-CHMP3A0A140T963 221 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 SLC12A3P55017 1021 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 IPMKQ8NFU5 416 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 ZNF518BQ9C0D4 1074 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 AFF4Q9UHB7 1163 aaKnown RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 KIAA1257Q9ULG3 409 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 M0QYT0 321 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 E2F6O75461 281 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 MMP14P50281 582 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 KDM7AQ6ZMT4 941 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 SNX19Q92543 992 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 ZNF512Q96ME7 567 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 TASP1Q9H6P5 420 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 SPATS2LQ9NUQ6 558 aaKnown RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 ANP32DO95626 131 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 OR1G1P47890 313 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 DNAJC3Q13217 504 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 HIC1Q14526 733 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 TMEM259Q4ZIN3 620 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 WDR49Q8IV35 697 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 GLIS3Q8NEA6 775 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 SEPT5Q99719 369 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 TLR10Q9BXR5 811 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 DDIT4Q9NX09 232 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 FRMPD4Q14CM0 1322 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 MYOM1P52179 1685 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 A0A087WZ62 844 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 TFRCP02786 760 aaKnown RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 ACO1P21399 889 aaKnown RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 EVX2Q03828 476 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 DNERQ8NFT8 737 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 ELMO3Q96BJ8 720 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 ZNF669Q96BR6 464 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 FDXACB1Q9BRP7 624 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-205ENST00000533464 ARHGEF38Q9NXL2 777 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 FAM198AQ9UFP1 575 aa18.32■□□□□ 0.52
PHRF1-205ENST00000533464 DPYSL4O14531 572 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 GRIN3BO60391 1043 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 PTGER2P43116 358 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 RAP1GAPP47736 663 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 SLC26A2P50443 739 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 LAMTOR4Q0VGL1 99 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 CLEC16AQ2KHT3 1053 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 EMC1Q8N766 993 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 MOSPD1Q9UJG1 213 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 USP20Q9Y2K6 914 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 TRIM49D1C9J1S8 452 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 OTUD4Q01804 1114 aaKnown RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 CD302Q8IX05 232 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 CPB2Q96IY4 423 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 FRMD8Q9BZ67 464 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 EIF4E1BA6NMX2 242 aaKnown RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 GTF2A2P52657 109 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 KCNA1Q09470 495 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 MEA1Q16626 185 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 MGAT5BQ3V5L5 792 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 C4orf22Q6V702 233 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 ARHGEF19Q8IW93 802 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 DCP1BQ8IZD4 617 aaKnown RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 STAMBPL1Q96FJ0 436 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 EML4Q9HC35 981 aaKnown RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 PRG3Q9Y2Y8 225 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 ZC3H4Q9UPT8 1303 aaKnown RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 CCT8L1PA6NM43 557 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 DDX3XO00571 662 aaKnown RBP eCLIP18.31■□□□□ 0.525e-9■□□□□ 8.7
PHRF1-205ENST00000533464 HNRNPCL1O60812 293 aaKnown RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 B3GAT3O94766 335 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 PYGBP11216 843 aa18.31■□□□□ 0.52
PHRF1-205ENST00000533464 TTC39BQ5VTQ0 682 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-205ENST00000533464 C17orf102A2RUQ5 167 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 UPP2O95045 317 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 CXCL8P10145 99 aa18.3■□□□□ 0.52
PHRF1-205ENST00000533464 CAPRIN1Q14444 709 aaKnown RBP18.3■□□□□ 0.52
PHRF1-205ENST00000533464 C15orf52Q6ZUT6 534 aaKnown RBP18.3■□□□□ 0.52
PHRF1-205ENST00000533464 TFB1MQ8WVM0 346 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms