RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 TFRCP02786 760 aaKnown RBP8.46□□□□□ -1.05
CTNND1-234ENST00000532844 RALBP11234 206 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 CPB1P15086 417 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 MAGEA4P43358 317 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 CENPCQ03188 943 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 STILQ15468 1287 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 MAPRE1Q15691 268 aaKnown RBP8.46□□□□□ -1.05
CTNND1-234ENST00000532844 ANKS1AQ92625 1134 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 CYFIP2Q96F07 1278 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 PNKPQ96T60 521 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 MKNK1Q9BUB5 465 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 SPON1Q9HCB6 807 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 TMEM161AQ9NX61 479 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 ITGB1BP2Q9UKP3 347 aa8.46□□□□□ -1.05
CTNND1-234ENST00000532844 GRAP2O75791 330 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 NR3C2P08235 984 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 RFC5P40937 340 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 HSD17B4P51659 736 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 NUP107P57740 925 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 PSMC6P62333 389 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ITPK1Q13572 414 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 LAMB3Q13751 1172 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 TPCN2Q8NHX9 752 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 USP33Q8TEY7 942 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 CASKIN2Q8WXE0 1202 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 RMDN1Q96DB5 314 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 IL17RAQ96F46 866 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ERP44Q9BS26 406 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 RUSC1Q9BVN2 902 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 TEX13BQ9BXU2 312 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 OSBPL8Q9BZF1 889 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 RANBP17Q9H2T7 1088 aaKnown RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ZNRF3Q9ULT6 936 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 KIF20BQ96Q89 1820 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 TMEM120BA0PK00 339 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 RALAP11233 206 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 GTF2H1P32780 548 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 COILP38432 576 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ATXN3P54252 364 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 SNRPFP62306 86 aaKnown RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 DCAF4L1Q3SXM0 396 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 EPC2Q52LR7 807 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ELMO2Q96JJ3 720 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 MARCOQ9UEW3 520 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 PCDHGB4Q9UN71 923 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 EEF2KO00418 725 aaKnown RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 P4HA2O15460 535 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 MYO1DO94832 1006 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 TRIM25Q14258 630 aaKnown RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 TRAPPC11Q7Z392 1133 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 SPATA2LQ8IUW3 424 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 DTX3LQ8TDB6 740 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 SGSM3Q96HU1 749 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ZFP42Q96MM3 310 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ROPN1BQ9BZX4 212 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 THAP2Q9H0W7 228 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 SMARCAD1Q9H4L7 1026 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ZNF556Q9HAH1 456 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 ROPN1Q9HAT0 212 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 METTL5Q9NRN9 209 aaKnown RBP8.46□□□□□ -1.06
CTNND1-234ENST00000532844 PCDHB2Q9Y5E7 798 aa8.46□□□□□ -1.06
CTNND1-234ENST00000532844 SPATA31A1Q5TZJ5 1347 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 TRIM13O60858 407 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 KCNJ1P48048 391 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 ARMCX4Q5H9R4 360 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 CYP4A22Q5TCH4 519 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 TRPM8Q7Z2W7 1104 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 CLEC4FQ8N1N0 589 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 EME1Q96AY2 570 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 PLEKHA8Q96JA3 519 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 RIT2Q99578 217 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 MFSD1Q9H3U5 465 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 H2AFY2Q9P0M6 372 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-234ENST00000532844 TMA7Q9Y2S6 64 aaKnown RBP8.45□□□□□ -1.06
CTNND1-234ENST00000532844 GPR75-ASB3A0A0A6YYF3 556 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 E2F8A0AVK6 867 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 ZNF839A8K0R7 811 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 IL18RAPO95256 599 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 PDGFRBP09619 1106 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 KCNA2P16389 499 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 SERPINB9P50453 376 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 ACCSLQ4AC99 568 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 ATF7IP2Q5U623 682 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 TTC39BQ5VTQ0 682 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-234ENST00000532844 GPAT2Q6NUI2 795 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 BARGINQ6ZT62 677 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 AGGF1Q8N302 714 aaeCLIP8.45□□□□□ -1.06
CTNND1-234ENST00000532844 DNAJC9Q8WXX5 260 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 SEPT1Q8WYJ6 367 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 LRRC39Q96DD0 335 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 ASIC4Q96FT7 647 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 KCNH7Q9NS40 1196 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 SELENONQ9NZV5 590 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 IGSF9BQ9UPX0 1349 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 C3orf70A6NLC5 250 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-234ENST00000532844 E7ENQ6 273 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 MSH4O15457 936 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 WEE2P0C1S8 567 aa8.45□□□□□ -1.06
CTNND1-234ENST00000532844 DDX5P17844 614 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms