RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CEP68Q76N32 757 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 USP37Q86T82 979 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 SYNPOQ8N3V7 929 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 USP13Q92995 863 aaPredicted RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 INTS4Q96HW7 963 aaKnown RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 SEPT5Q99719 369 aaPredicted RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 REEP2Q9BRK0 252 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 TIPINQ9BVW5 301 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 OXCT2Q9BYC2 517 aaPredicted RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ADAM33Q9BZ11 813 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ZCWPW1Q9H0M4 648 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 EBF3Q9H4W6 596 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 TASP1Q9H6P5 420 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 TMLHEQ9NVH6 421 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 HSFX1Q9UBD0 423 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 NOL7Q9UMY1 257 aaKnown RBP9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 ASB3Q9Y575 518 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 FREM2Q5SZK8 3169 aa9.96□□□□□ -0.82
CHMP4A-205ENST00000531158 CELSR3Q9NYQ7 3312 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 CCDC163A0A0D9SF12 145 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 ANKRD63C9JTQ0 380 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 LAD1O00515 517 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 HNRNPDLO14979 420 aaKnown RBP9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 OGTO15294 1046 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 RNF40O75150 1001 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 EGFP01133 1207 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 F11P03951 625 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 PLA2G4BP0C869 781 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 ARSAP15289 507 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 CCDC142Q17RM4 750 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 STPG1Q5TH74 334 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 PSAPL1Q6NUJ1 521 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 DTHD1Q6ZMT9 781 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 CMTM8Q8IZV2 173 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 GIPC2Q8TF65 315 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 ZC3H10Q96K80 434 aaKnown RBP9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 FAM84AQ96KN4 292 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 TMEM121BQ9BXQ6 578 aaPredicted RBP9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 RAB34Q9BZG1 259 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 DUSP15Q9H1R2 295 aaPredicted RBP9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 GKN1Q9NS71 199 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 IGSF5Q9NSI5 407 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 BLOC1S4Q9NUP1 217 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 TBX20Q9UMR3 447 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 WASF3Q9UPY6 502 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 STK24Q9Y6E0 443 aa9.95□□□□□ -0.82
CHMP4A-205ENST00000531158 VWA3AA6NCI4 1184 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 EIF4E1BA6NMX2 242 aaKnown RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 DPYSL4O14531 572 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 TRDMT1O14717 391 aaKnown RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 GIPC1O14908 333 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 DCLK1O15075 740 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 HAPLN1P10915 354 aaPredicted RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 ODC1P11926 461 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 MPLP40238 635 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 MATR3P43243 847 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 ACOT2P49753 483 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 LIG4P49917 911 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 ZNF131P52739 623 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 SMTNP53814 917 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 NLRP12P59046 1061 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 HMGN5P82970 282 aaKnown RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 RUNX3Q13761 415 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 GNL2Q13823 731 aaKnown RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 MGAT5BQ3V5L5 792 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 PLK5Q496M5 336 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 ARHGAP15Q53QZ3 475 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 SDHAF4Q5VUM1 108 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 TXNDC8Q6A555 127 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 CRELD2Q6UXH1 353 aaPredicted RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 CACNA2D4Q7Z3S7 1137 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 ITIH5Q86UX2 942 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 EFCAB13Q8IY85 973 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 C12orf50Q8NA57 414 aaPredicted RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 BICD1Q96G01 975 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 LOXL4Q96JB6 756 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 HHIPQ96QV1 700 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 SLC22A12Q96S37 553 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 LSM14BQ9BX40 385 aaKnown RBP9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 KCND2Q9NZV8 630 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 PCDH15Q96QU1 1955 aa9.94□□□□□ -0.82
CHMP4A-205ENST00000531158 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 K7ENM7 598 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 FGF19O95750 216 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 CDC25CP30307 473 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 GRIN1Q05586 938 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 TMEM132DQ14C87 1099 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 ZC2HC1CQ53FD0 456 aaPredicted RBP9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 WSCD1Q658N2 575 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 ARMCX5Q6P1M9 558 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 MAB21L3Q8N8X9 362 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 ZSWIM2Q8NEG5 633 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 CXorf38Q8TB03 319 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 GATA6Q92908 595 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 TMX3Q96JJ7 454 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 PKMYT1Q99640 499 aa9.93□□□□□ -0.82
CHMP4A-205ENST00000531158 PYM1Q9BRP8 204 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms