RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 MYBPHLA2RUH7 354 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 RNF225M0QZC1 329 aaPredicted RBP18.03■□□□□ 0.48
SF3B2-211ENST00000531041 FOXN3O00409 490 aaPredicted RBP18.03■□□□□ 0.48
SF3B2-211ENST00000531041 PER2O15055 1255 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 OR4Q2P0C623 313 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 NRIP1P48552 1158 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 CLCN4P51793 760 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 ZNF132P52740 706 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 ARPP19P56211 112 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 JAM2P57087 298 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 PSMC1P62191 440 aaKnown RBP18.03■□□□□ 0.48
SF3B2-211ENST00000531041 RAPGEF1Q13905 1077 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 NFE2Q16621 373 aaPredicted RBP18.03■□□□□ 0.48
SF3B2-211ENST00000531041 ZNF394Q53GI3 561 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 RBM23Q86U06 439 aaKnown RBP18.03■□□□□ 0.48
SF3B2-211ENST00000531041 PALB2Q86YC2 1186 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 MYCBPAPQ8TBZ2 947 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 MYLIPQ8WY64 445 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 MRFAP1L1Q96HT8 127 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 EDEM3Q9BZQ6 932 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 TTYH3Q9C0H2 523 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 GPR88Q9GZN0 384 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 NLRC4Q9NPP4 1024 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 MAFFQ9ULX9 164 aa18.03■□□□□ 0.48
SF3B2-211ENST00000531041 PATJQ8NI35 1801 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 TGM5O43548 720 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 PAEPP09466 180 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 ATF2P15336 505 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 ZNF75DP51815 510 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 ORC1Q13415 861 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 SLC39A12Q504Y0 691 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 TCEAL5Q5H9L2 206 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 SPECC1LQ69YQ0 1117 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 RNF19BQ6ZMZ0 732 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 CACNA2D4Q7Z3S7 1137 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 VSTM4Q8IW00 320 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 FAM71AQ8IYT1 594 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 RBBP8NLQ8NC74 664 aaPredicted RBP18.02■□□□□ 0.48
SF3B2-211ENST00000531041 C2orf15Q8WU43 125 aaKnown RBP18.02■□□□□ 0.48
SF3B2-211ENST00000531041 SLC22A17Q8WUG5 538 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 TMLHEQ9NVH6 421 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
SF3B2-211ENST00000531041 KIAA1257Q9ULG3 409 aa18.02■□□□□ 0.48
SF3B2-211ENST00000531041 ZNF638Q14966 1978 aaKnown RBP18.02■□□□□ 0.47
SF3B2-211ENST00000531041 GOLGA6L3A6NEY3 463 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 F8VZ95 297 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 GLUD1P00367 558 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 KRT5P13647 590 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 HYAL1Q12794 435 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 KCNC3Q14003 757 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 MDH1BQ5I0G3 518 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 PCED1BQ96HM7 432 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 SPAG5Q96R06 1193 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 GRPEL1Q9HAV7 217 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 HSFX1Q9UBD0 423 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 MYO6Q9UM54 1294 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.01■□□□□ 0.473e-11■■■□□ 15.6
SF3B2-211ENST00000531041 HCFC2Q9Y5Z7 792 aa18.01■□□□□ 0.47
SF3B2-211ENST00000531041 A0A1W2PQJ5 194 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 MTMR11A4FU01 709 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 VNN2O95498 520 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 USP8P40818 1118 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 ADCY1Q08828 1119 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 CCDC142Q17RM4 750 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 CFAP221Q4G0U5 840 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 C4orf50Q6ZRC1 276 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 C12orf29Q8N999 325 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 SPPL2BQ8TCT7 592 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 HDAC7Q8WUI4 952 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 BAP1Q92560 729 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 FUBP3Q96I24 572 aaKnown RBP eCLIP18■□□□□ 0.47
SF3B2-211ENST00000531041 HEXIM2Q96MH2 286 aaKnown RBP18■□□□□ 0.47
SF3B2-211ENST00000531041 LPIN3Q9BQK8 851 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 ABCB6Q9NP58 842 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 FBXW11Q9UKB1 542 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 PCDHB5Q9Y5E4 795 aa18■□□□□ 0.47
SF3B2-211ENST00000531041 PNMA6AP0CW24 399 aaPredicted RBP17.99■□□□□ 0.47
SF3B2-211ENST00000531041 VDRP11473 427 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.47
SF3B2-211ENST00000531041 CLCN1P35523 988 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 SOX5P35711 763 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 STAT1P42224 750 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 RTL10Q7L3V2 364 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 SPATA2LQ8IUW3 424 aaPredicted RBP17.99■□□□□ 0.47
SF3B2-211ENST00000531041 TCEAL8Q8IYN2 117 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 EFHBQ8N7U6 833 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 ATAD1Q8NBU5 361 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 MYLPFQ96A32 169 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 CYFIP2Q96F07 1278 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 PGLYRP2Q96PD5 576 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 B3GNT5Q9BYG0 378 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 PLEKHA4Q9H4M7 779 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 DPP7Q9UHL4 492 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 CAPN11Q9UMQ6 739 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 C2orf16Q68DN1 1984 aa17.99■□□□□ 0.47
SF3B2-211ENST00000531041 CYP26A1O43174 497 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 NCK2O43639 380 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 GYPCP04921 128 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 FOSL2P15408 326 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms